Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi757g00004 ATGGTTTCTGGAATTGTAGGTGTTGATTTTGTAATATTGATTTTAGGGAGTGAAAGTTCGGTACCTATAAAACATAACTCCAAAAAAAAACTTAGTAAAGGAGTTATCATTGCAATTTTTGTTGGTGGAGTTGTTCTGTTGTTTTTTGTAGTACTTGTCATTGTTCTTTGTTGTTTAAAGAAAAAAGATAATGGAAGCTCGAGAGTTGTTAAAGCGAAGGGACCTAGTGGTGGTGGAAGGACAGAAATAGTGAAAGAAGAATTTGGAAGTGGCGTGCAAGAATCTGAGAAAAACAAATTGGTTTTCTCTGAGGGCTGTTCTTATAATTTCGATCTCGAGGTTTCGTTGAGAGCTTCGGCCAAGGTTCTTGGAAAGGGAAGTTACGGAACCGCATATAAGGCTATATTGGAGGAAGCAACAACAGTTGTAGTGAAACGGTTGAAAGAAGTTGTAGTAGGAAAGAGGGAATTTGAACAGCAGACGGAGATTGTTGGAAGCATTGGAAATAACCTAAAGGTCGTTCCACTCCACGCTTGTTATTATTCGAAGGATGAGAGGCTTTTGGTTTGTGACTATTTCCCAAATGGCAATCTATCTATACTCTTGCATGGTATGCATTTCTGCGGACGAGCTAGCTTAGATTTGAACATGGGAATAAAAATCACTCTCGGAATTTCTCGGGGAATTGCACATTTACATTCAGTTGGCGGTCCAAAATTCACACACGGAAATGTGAAATCCTCCAATGTCCTCATAAGCCAAAATTACGATGGCTGCATTTCAGATTTCGGCCTGACACCAATCAAGAATGTTCCTGCGACCCCATCCAGAACCGCAGGGTACCGTGCTCCCGAGGTAATCGAAACTCAGAAACACACTCATAAATCAGACGTGTACAGTTTCGGTGTCCTCCTTTTGGAAATGCTTACTGGTAAAGCGCCACAACAGTCTCCAGTATGCGATGACATGGTTGATCTGCCTAGGTGGGTTCAGTCTGTCGTTAGGGAGGAATGGACCGCCGAGGTTTTTGATGTGGAACTAATGAGGTACCAAAGTATTTTTTTCTAA 1068 0.4139 MVSGIVGVDFVILILGSESSVPIKHNSKKKLSKGVIIAIFVGGVVLLFFVVLVIVLCCLKKKDNGSSRVVKAKGPSGGGRTEIVKEEFGSGVQESEKNKLVFSEGCSYNFDLEVSLRASAKVLGKGSYGTAYKAILEEATTVVVKRLKEVVVGKREFEQQTEIVGSIGNNLKVVPLHACYYSKDERLLVCDYFPNGNLSILLHGMHFCGRASLDLNMGIKITLGISRGIAHLHSVGGPKFTHGNVKSSNVLISQNYDGCISDFGLTPIKNVPATPSRTAGYRAPEVIETQKHTHKSDVYSFGVLLLEMLTGKAPQQSPVCDDMVDLPRWVQSVVREEWTAEVFDVELMRYQSIFF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi757g00004 355 PANTHER OS05G0588300 PROTEIN 25 349 - -
Vivi757g00004 355 Gene3D Transferase(Phosphotransferase) domain 1 193 353 - -
Vivi757g00004 355 ProSitePatterns Protein kinases ATP-binding region signature. 123 154 IPR017441 GO:0005524
Vivi757g00004 355 Gene3D Phosphorylase Kinase; domain 1 115 192 - -
Vivi757g00004 355 Pfam Protein kinase domain 120 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi757g00004 355 ProSiteProfiles Protein kinase domain profile. 117 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi757g00004 355 SUPERFAMILY Protein kinase-like (PK-like) 121 337 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi757g00004 22 353 Receptor kinase-like Gene Family AT5G58300 67.169 1.13e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi757g00004 Pkinase 3.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi757g00004 - - vvo:131636106 658.292