Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi754g00005 ATGGAAACTAAACACCGCACCGTGCGGACCCTAGTTTCAAAGCTAAGCTCCGTTTCCGAACGAACCCGAATCGAAGCTCTCTGCGAGCTTCGTCAAATGTCCAAACAAGACCCGGAAACCCGACCCGTAATCGCAGAATCCGGCGCGATTCCGTATCTAGCAGAAACTCTCTATTCTTCTTCTCACCCCTCGCAAGAAAACGCAACCGCAACGCTTCTTAACCTCTCCATAACAGAAAAAGAACCTATCATGTCCACGCGCGGTGTTCTCGACGCGCTCGCACACGTTATCTCTCATCATTCCTCAACCTCCGCTCCCGCCGCCGTTCAATCCGCCGCCGCCACAATTCACAGCCTTCTTTCGTCAGTAGATGATTACCGTACCGTCGTTGGATCCAAACGCGAGATCGTTTACGCTCTTGTTGACATCCTCCGTTGTCACCGTTCATCACCGCCGCGAACGGTGAAAGATTCCTTGAAAGCGCTTTTCGCGATCGCGCTTCATCCGTTAAACCGTGGTACCATGGTTCAATTCAGTGTTGTTCCGGCGCTGTTCTCTCTCATCGTTAACGACGGTAGAGTAGGGATAGTTGAAGACGCAACCGCCGTCATCGCGCAGGTTGCCGGTTGCGAGGAAAGTATTGAGGCTTTCCGGAAGGTTTCTGGTGTTGGAGTGCTCGCAGATCTACTCGATCTTGCGACAGGTTCTAGTATGAGGACGAGAGAAAATGCGGTGTCGGCGCTGCTTAATCTGGTGCGATGTGGCGGAGATGCGGTTGCCGGAGATGTTAGAGACGCCGTGGCCTTTGGTGCGTTGGATGGGATTGCTGATGTTAGAGATAAAGGGAGCGCTAAGGGGAAGAGTAAGGCTACGGAGTTGATGAAGGTGATGCTTGGTAATGGTAATGGTAATGGGAATGGTAATGTCGTTTTCAATAGTGGTTCGTCGTTTGGTTCTTTGATGAATGAAGATAGTGTATCGTCGTTTTGA 990 0.5121 METKHRTVRTLVSKLSSVSERTRIEALCELRQMSKQDPETRPVIAESGAIPYLAETLYSSSHPSQENATATLLNLSITEKEPIMSTRGVLDALAHVISHHSSTSAPAAVQSAAATIHSLLSSVDDYRTVVGSKREIVYALVDILRCHRSSPPRTVKDSLKALFAIALHPLNRGTMVQFSVVPALFSLIVNDGRVGIVEDATAVIAQVAGCEESIEAFRKVSGVGVLADLLDLATGSSMRTRENAVSALLNLVRCGGDAVAGDVRDAVAFGALDGIADVRDKGSAKGKSKATELMKVMLGNGNGNGNGNVVFNSGSSFGSLMNEDSVSSF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi754g00005 329 Gene3D - 2 278 IPR011989 -
Vivi754g00005 329 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Vivi754g00005 329 SMART arm_5 37 77 IPR000225 GO:0005515
Vivi754g00005 329 SMART arm_5 210 253 IPR000225 GO:0005515
Vivi754g00005 329 SMART arm_5 168 209 IPR000225 GO:0005515
Vivi754g00005 329 FunFam ARM repeat superfamily protein 2 303 - -
Vivi754g00005 329 SUPERFAMILY ARM repeat 6 260 IPR016024 -
Vivi754g00005 329 PANTHER U BOX DOMAIN-CONTAINING 7 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi754g00005 8 304 U-box Gene Family AT2G23140 32.550 4.87e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi754g00005 - - gmx:100787115 465.307