Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi754g00003 ATGGAGTTGCAGGGTGGTAGAATCGATCCAAAAAGTGGTTTTTGTAGCTCTAATTCAATCTTCTACAGCAAGAGACAACCCATCTCACTCCCTCCAAACCTCTCCTTAGACGCCACCACTTTCATCTCCTCCCATGCACATCACGGCCACACCGCCTTCATCGACGCCTCCACCGGCCGCCACTTCACCTACACAGAACTCTGGAGATCTGTTGAAGCTGTCACCTCCTCTCTCTCCAACATGGGAATCAAAAAAGGAGACGTTATTCTCCTTCTCTCTCCCAACTCCATCTACTTCCCTGTGGTGTGTCTCTCCGTCATGTCCCTCGGAGCCATCATTACCACCACCAACCCCCTCAACACAACACCGGAAATCGCAAAGCAGATCGCAGATTCCAAACCTGTTCTCGCCTTCACAATCCCCCTCTTGCTTTCGAAAGTTACCGCAGCTTCACCAACTCTTCCAATTATTCTCATGGATGTTGATGCAAACTTTTCATCATCATCATCATCAAATTCAATCACACTAGAGGAAATGATGAAAGAAGAACCTGAGTTGAGAAGTGCGAGGGAGCGAGTCAACCAGGATGACACAGCTACTCTACTCTACTCATCCGGAACTACCGGACCAAGCAAAGGAGTAGTATCTTCGCATAAGAATCTCATAGCGATGGTTCAAAATGTGTTAACTAGGTTTAGCAAACAAGAAGAAACATTCATTTGCACCGTTCCCATGTTTCACATATACGGTCTAGCGGTTTTCGCTACGGGGCTTCTAGCTCTAGGTTCAACCATTGTTATTCTCTCCAAATTCGAAATGCACGACATGCTTTCATCTATTGAGAAATTCAGAGTTGGTGTTCTACCGCTTGTGCCGCCGATACTGGTTGTTATGCTCAACAATGCAGACGCGATTAAGAGAAAGTACGATGTGAGTTCTCTTCATTCGGTGCTATGTGGCGGGGCTCCTTTGAGTAAGGAAGTTACGGAAGGGTTTATTGATAAGTACCCTAAGGTTGTCATTCGTCAGGGTTATGGTCTGACAGAATCGGCCGGAGTTGGGAGTTCGACTGACTGTTTGGAAGAGAGTCGGAAGTATGGAACGGCGGGGCTATTGTCTTGTTCTACTGAGGCTATGATCGTAGATACTGAAACTGGTGAACCACTTCCGGTTAACCGAACTGGAGAGCTTTGGCTCCGAGGTCCCACCATCATGAAAGGTTATTTCAATAATGAAGAGGCAACTAAATCAACACTTACTTCAGATGGTTGGTTAAAAACTGGAGATGTTTGCTATTTTGATAGCGATGGATACTTATTTGTGGTTGATCGGTTGAAAGAGCTAATTAAATACAAAGGATATCAGGTCCCTCCAGCAGAATTAGAGGCTTTGTTGCTAACTCATCCTGCAATTTTAGATGCTGCTGTTATACCGTATCCTGAGGAGGCTGGACAATATCCAATGGCATATGTGGTCAGGAAGGATGGAAGTAACATATCAGGCAGCCAAATTATGGAATTTGTTGCAGGACAGGTGGCTCCATATAAAAAAATTCGAAAAGTGGCATTCATATCTTCCATACCCAAAAATCCATCTGGCAAAATTCTTCGCAAGGATCTCATCAAGCTTGCAACATCTAAACTTTAA 1647 0.4487 MELQGGRIDPKSGFCSSNSIFYSKRQPISLPPNLSLDATTFISSHAHHGHTAFIDASTGRHFTYTELWRSVEAVTSSLSNMGIKKGDVILLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTTPEIAKQIADSKPVLAFTIPLLLSKVTAASPTLPIILMDVDANFSSSSSSNSITLEEMMKEEPELRSARERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQNVLTRFSKQEETFICTVPMFHIYGLAVFATGLLALGSTIVILSKFEMHDMLSSIEKFRVGVLPLVPPILVVMLNNADAIKRKYDVSSLHSVLCGGAPLSKEVTEGFIDKYPKVVIRQGYGLTESAGVGSSTDCLEESRKYGTAGLLSCSTEAMIVDTETGEPLPVNRTGELWLRGPTIMKGYFNNEEATKSTLTSDGWLKTGDVCYFDSDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPEEAGQYPMAYVVRKDGSNISGSQIMEFVAGQVAPYKKIRKVAFISSIPKNPSGKILRKDLIKLATSKL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi754g00003 548 Pfam AMP-binding enzyme C-terminal domain 460 534 IPR025110 -
Vivi754g00003 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 542 - -
Vivi754g00003 548 SUPERFAMILY Acetyl-CoA synthetase-like 44 545 - -
Vivi754g00003 548 Gene3D - 18 446 IPR042099 -
Vivi754g00003 548 FunFam 4-coumarate--CoA ligase 2 447 547 - -
Vivi754g00003 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 22 446 - -
Vivi754g00003 548 Pfam AMP-binding enzyme 46 451 IPR000873 -
Vivi754g00003 548 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Vivi754g00003 548 Gene3D - 447 547 IPR045851 -
Vivi754g00003 548 CDD 4CL 30 540 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi754g00003 8 548 Monolignol Biosynthesis Gene Families AT1G20500 63.853 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi754g00003 K10526 - gmx:100811344 823.157