Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi752g00026 ATGGAGTCTGATCAATATGAACAAGGTGGTGATGGTGGTGGTGATGATCAAGGTGATGCTCAAGCAAAACAAGTGATCAATATTCTTAGGTCCTATGAGTGCAATTTCTGTAAGAGAGGCTTCTCTAATGCACAAGCACTAGGTGGTCACATGAATATTCATAGAAAAGACAAAGCAAAACTCAAGCAACAATCTTTAAACATGGAGGCAAATTCTAGTGATGTTCAAGAGGTGAACAAGTTAGTATTACCAAACTTGAATTCTAGTATTGTGTTGTCTCAATCTCAACAACAAGATCAACAACACCATGTTCCTTCTAGAGATATTAATGAAGCTCTTATGACTCAACTGAGGCAACAACTTCCATTTTTTTCTGAATCACCAACAAAGAGTGAAATGCAAAAGCCACAACCATCACAAGGAGAAACTACTACTGCTGCTACTAGTACTACAGAAGAGGCTTTGTTATTGTCTGGTGAAGATTCTTCAATGGAGTTAGACCTAGAACTGAGATTAGGGCCTGAGCCACATGATTCATCATCAGCAGCACCAACGGGTACCAGAAAATTCTTTTGA 576 0.3889 MESDQYEQGGDGGGDDQGDAQAKQVINILRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSLNMEANSSDVQEVNKLVLPNLNSSIVLSQSQQQDQQHHVPSRDINEALMTQLRQQLPFFSESPTKSEMQKPQPSQGETTTAATSTTEEALLLSGEDSSMELDLELRLGPEPHDSSSAAPTGTRKFF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi752g00026 191 MobiDBLite consensus disorder prediction 124 191 - -
Vivi752g00026 191 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Vivi752g00026 191 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Vivi752g00026 191 MobiDBLite consensus disorder prediction 1 20 - -
Vivi752g00026 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Vivi752g00026 191 Gene3D Classic Zinc Finger 21 82 - -
Vivi752g00026 191 PANTHER OS07G0101800 PROTEIN 24 176 - -
Vivi752g00026 191 MobiDBLite consensus disorder prediction 124 157 - -
Vivi752g00026 191 Pfam C2H2-type zinc finger 32 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi752g00026 26 173 C2H2 Transcription Factor Family AT3G09290 38.312 6.81e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi752g00026 zf-C2H2_6 1.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi752g00026 - - tpra:123918605 191.43