Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi751g00001 ATGGTTGTTCACGCGTTCTTCGATGGTACCATCGAGGTTATGGGTTTCATGCAAGGCTGGAAGGTTGGAGAAGTTGTGGGGTGGTATCATTCTCATCCTGGCTCTGGTTGTTGGCTTTCGGGGATTGATGTTTCGACGCAGATGTTGAATCAGCAATTTCAGGAGCCGTTTTTGGCGGTTGTGATTGATCCGACGAGGACTGTTTCTGCTGGCAAAGTTGAGATTGGGGCTTTCAGGACTTATCATGAAGGTTATAAGCCTCAAGATGATACTATTTCTGAGTATCAAACTATACCTCTTAATAAGATTGAAGATTTTGGAGTCCGTTATAAACAGGGTCTGGTGACTTTAAATTTCTTGCAAGAGAAAAAGGAGGCGGACTTTCGTTATGGACTTCTAAGGGTTTGGGAAAATGCTGAATCAATTGCTTTCTATGGTGGTGAAGAGAGCGAGATGCAACTTCTTCTGATGCGCTTCAAAAGTGCTTTCGAAAATCTGACTGCAACCCAAGAAGTTGTTTCACAAATTCTGTTGACTACAGATGAAGAGTTTAAAGCTGCTATATCTGCTGCAAAGAAGGCATTTCCAGCATGGCGTAACACTCCGGTTACGACACGTCAACGTGTTATGTTGAAGTTCCAGGAGCTCATTCGCAAAGATATGGATAAACTTACTGTTAGAAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGCAGAGCTGGTCGTGATCAATTGCCCTCTACAAGTCTCTTGTACTATGAAGCATTTATATTAAGAAAGTCAGTTATGCAAATGCTTGAATATTGTGAAGGATTTGGATGTTGTAGGAAAAGAATTCTTGAGAGTTTTGGAGAGAAGGTACTGAAGTATACAGCTCTAGATACTACGGAAAAACATGTGACGCCTGTAGACACCCAAACACAATTTCCAGAAGTTTGGAGTATCTCACTGCTGCTTGTTCACTACGCTAGAAAGGAGGTTCTCGAGTTTTCATCACCAGATGTTTCCTGTGGCTGTTGCATGTGGCAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGATATTTGATGACGTGAGAAGACGGGAAGCAAGCCAGATTTACGAGTATAGTTTTTCAGATCACACCTTGTGTGTAAACGATGTTGTGATTGGTTCTGGAGGGTGCAATGCAATTATAGTTTCAGCATCAGATGATCGGACCTGTAAGGTCTGTTTTACTATTATAGAAAGTTTGTGA 1251 0.4157 MVVHAFFDGTIEVMGFMQGWKVGEVVGWYHSHPGSGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYHEGYKPQDDTISEYQTIPLNKIEDFGVRYKQGLVTLNFLQEKKEADFRYGLLRVWENAESIAFYGGEESEMQLLLMRFKSAFENLTATQEVVSQILLTTDEEFKAAISAAKKAFPAWRNTPVTTRQRVMLKFQELIRKDMDKLTVRNIPKSMEAFYQESGRAGRDQLPSTSLLYYEAFILRKSVMQMLEYCEGFGCCRKRILESFGEKVLKYTALDTTEKHVTPVDTQTQFPEVWSISLLLVHYARKEVLEFSSPDVSCGCCMWQYLCSKTIRERPRIFDDVRRREASQIYEYSFSDHTLCVNDVVIGSGGCNAIIVSASDDRTCKVCFTIIESL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi751g00001 416 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 24 55 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vivi751g00001 416 Pfam Aldehyde dehydrogenase family 168 225 IPR015590 GO:0016491
Vivi751g00001 416 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 185 224 IPR016162 GO:0016491
Vivi751g00001 416 SUPERFAMILY JAB1/MPN domain 3 83 - -
Vivi751g00001 416 FunFam COP9 signalosome complex subunit 5 2 127 - -
Vivi751g00001 416 Gene3D - 226 312 IPR027417 -
Vivi751g00001 416 Gene3D Cytidine Deaminase, domain 2 21 129 - -
Vivi751g00001 416 SUPERFAMILY ALDH-like 168 226 IPR016161 GO:0016491
Vivi751g00001 416 ProSiteProfiles MPN domain profile. 1 84 IPR037518 -
Vivi751g00001 416 SMART pad1_6 1 83 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vivi751g00001 416 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 24 234 - -
Vivi751g00001 416 Pfam ABC transporter transmembrane region 2 110 168 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi751g00001 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 299 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi751g00001 168 227 Aldehyde Dehydrogenase Gene Family AT2G14170 80.000 1.05e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi751g00001 K09613 - tcc:18587619 178.333