Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi750g00010 ATGGAGAGAAAAGGAACCAACAATGATTACAGTTCAGAGGACGAGGGAACTCAGCATTACAGGCGTGGAGGGTACCATGCTGTTCGAGTTGGTGATACTTTCAACAATGGCTGCTATGTTGTGCAGGATAAACTCGGTTGGGGTCATTTTTCTACTGTTTGGCTCGCTTGGGATACTCTCAAATCGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCACAGCACTACACTGAAGCTGCAAAGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTAATGACAAGAAATGTGTGGTGAAGCTTTTGGATCACTTTGAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGAGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGCGGGGTTCCTCTCTCTATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGGATTACTTGCACCGCGAGCTTTCTATCATACACACCGATTTGAAGCCAGAGAATGTGTTGCTTCTTTCATTGATAGATCCATGTAAGGATCCTAGGAAATCTGGTGCTCCACTCATCCTTCCAAACACCCAGGATAAGGCTGTGTCTAATAATGGCGTTATCCAAAACAGTAAAACGGGGAATGCAGATCTAACGAAGAACCAAATGAAGAAAATGCAGGGAAAGGCTAAGAGGGTTGCTCAAGGCTGTGTTGAGAAGGAAAGTTCTGATGAAGCCGGGGAGGACTATAAAGAACCGGAGCAGGGAAGTTGTAATAATGGTGTAAAATCAAGTGCAGAATCTGTTGAAAACAAATCCAATAGTTCTTTCAGTGAAGGCGGATCAACACAGACTTCTGAAAAGGTTGTTACACAAGGAAATCAAGGTCATAGCAAAAGTAGCCGTTCCGTGAAAAAGAAGCTGCTGGCAGCTGTTGATCTAAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTGGGATCTAAATACTCAACTCCAGCAGATATGTGGTCATTTGCTTGCATTTGCTTTGAGTTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTCGGAAAGATGCCTACCAAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACACGGTGACCTAAGGCACATTCGCGACTTGCGATTCTGGCCACTAAATAAGATTCTGATGGAAAAGTATAATTTCAGTGAACAAGATGCTAAAGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAGAAGAGACCAACAGCTGCTCAGTGCCTTAGTCATCCATGGCTCAGTGCAGTTCCCCGCACCATTGAGCCTTCACTGACTAGTACACAACCTGATGCAACCAGCCAGGAATTGCTCGAAAAGAGAAAAAGGGAAAAAGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAACATATCCATTAATCAAACTTCTGAGTCAATCAAAGTCTCTGAACCTGTAAAGTCATCAATATAG 1635 0.4287 MERKGTNNDYSSEDEGTQHYRRGGYHAVRVGDTFNNGCYVVQDKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAKDEIKILKQIEEGDPNDKKCVVKLLDHFEHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSLIDPCKDPRKSGAPLILPNTQDKAVSNNGVIQNSKTGNADLTKNQMKKMQGKAKRVAQGCVEKESSDEAGEDYKEPEQGSCNNGVKSSAESVENKSNSSFSEGGSTQTSEKVVTQGNQGHSKSSRSVKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFEFATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPTKIALGGRYSRDFFNRHGDLRHIRDLRFWPLNKILMEKYNFSEQDAKDMADFLLPILDFDPEKRPTAAQCLSHPWLSAVPRTIEPSLTSTQPDATSQELLEKRKREKEKAEQELVEVGVRNISINQTSESIKVSEPVKSSI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi750g00010 544 MobiDBLite consensus disorder prediction 260 302 - -
Vivi750g00010 544 MobiDBLite consensus disorder prediction 206 225 - -
Vivi750g00010 544 Pfam Protein kinase domain 315 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi750g00010 544 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi750g00010 544 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Vivi750g00010 544 FunFam CMGC/SRPK protein kinase 25 124 - -
Vivi750g00010 544 MobiDBLite consensus disorder prediction 237 255 - -
Vivi750g00010 544 CDD STKc_SRPK 28 479 - -
Vivi750g00010 544 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 504 - -
Vivi750g00010 544 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Vivi750g00010 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Vivi750g00010 544 ProSiteProfiles Protein kinase domain profile. 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi750g00010 544 Gene3D Transferase(Phosphotransferase) domain 1 122 480 - -
Vivi750g00010 544 Coils Coil 499 523 - -
Vivi750g00010 544 FunFam Serine/threonine-protein kinase SRPK-like protein 309 479 - -
Vivi750g00010 544 SMART serkin_6 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi750g00010 544 MobiDBLite consensus disorder prediction 206 305 - -
Vivi750g00010 544 SUPERFAMILY Protein kinase-like (PK-like) 34 491 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi750g00010 8 543 EF-hand Containing Proteins AT5G22840 66.234 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Vivi750g00010 Pkinase 1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi750g00010 K08832 - gmx:100790060 846.269