Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi750g00007 ATGTCTCGCCGCGGTGGAGGAAATCATTCTGAAAATCGCCGGAGTCAACCATCTCCTGCACATTCTCAACAATCATCCGTCAATGCTGCAGGATCGGGCCGTGGTAGTGGTGGCCGTGGCTCTCGCGGTGGTCGTACTGCCGGTCCTCCTCCGTCGTATGCTCCAGCACCAGTTACCTCTCCTCCATCTGTTGCAGCTGTTCGTCCATCCGTTGCAGCGCCTGTTGCTTCCTCGAGCTCGGCTCCGATTTCCATTGAGAGCCTGACTGCGGAAGTTCAACAAAAGGTTACTCTAGAGTCTGCTCCTTCGTCTCAGAAGGCGGTTAGGTTCCCTAACCGACCTGGTTACGGTCAATTGGGAAGGAAAATTCAAGTTCGTGCTAATCATTTTCAGTTGCGAGTGGGTGATAAGGATCTACACCACTATGATGTATCTATTTCTCCAGAGATTACTTCAAAAAAAGTGTGTAGAGAAATCATCAACCAGTTAGTGAAAATGTATAAGGAATCCCAGTTAGATAACCGCATACCTGCTTACGATGGGAGTAAAAGCCTGTATACTGCTGGCCCATTACCTTTTACTTCCAAGGTTTTTGTGGTTAACTTGACAGATGAAAATAGAGGGTCCTCTTCTGATTCTGAAAGGAAGAAGCGTGATCGGGAGTTTAAGGTTACTATAAAGTTTGCTACCAAGCCGGATCTCTACCACCTTACTCAGTTTCTCCGTCGGTTGCAGCTGGATTGTCCTTATAACACCATTCAAGCTCTTGACATTGCTTTGAGGGCAACATCATCTGAAAAGTATATTGTTGCTGGGAGATCTTTTTTCTCTCCGAGTTTGGGGCAACCGGGTCCTCTTGGTGGGGGGACGGAGTATTATAGAGGTTTCTATCAAAGCATTAGGCCAACTCAAATGGGGCTTTCCCTCAACATAGATGTATCTTCAAGAGCTTTTTATGAACCAATTCTTGTCACTGAATTTGTTCGCAAGCATTTTAATTTGAATTTTTCAAGGGCACTGTCTGATCAAGATCGTCTCAAGATCAGGAAAGTCTTGAGAGGTGTCAAGGTAAGACTATCTCATAGTGGGAAAATAAGGAGTTGCAAGGTGGCCGGTCTCTCAAGAGAACCACTCAAAGACCTAACGTTCACTCTTGAAGACAATGCGAATAGGAAAAAAGTAATTGATTATTTCCATGAGAAATACAATATTGTATTAAAGTATCCACTTCTTCCTGCTCTCCAAGCTGGAACTGACTCGAGACCTACTTATTTCCCCATGGAGCTCTGTCAAATTGAGCCTGGACAGAGGTACTCCAAAAGATTGAATGAAGAACAAGTAACTGCTCTTTTAAAGGCTACTTGTCAGCGTCCTCCTCAGAGAGAAAGTGATATTAAACATATTGTGATGCAACACCGTTTCAACGCGGATAATGTTGCGAAAGAATTTGGAATAAATGTTAGGGAAGAGCTTGCCCTTGTTGATGCTCGCGTGTTACCTCCTCCAACGCTCAAATATTGTGGAACTGGAAGTGAATCAAAAATTGACCCTCGGATGGGTGCATGGAATATGATTAATAAGAAAATGGTTGATGCCGGCAAGGTGCAGTTTTGGACTTGCGTTTGCTTTTCACAAAGAATGGACCCAACTCAATTTTGTGACCAATTGGTTAATATGTGTCAAAGCAGGGGAATGCGTTTCAACCCAGATCCTTTGGTACCAATATTCCCAGGGAATCCAAATCAAATTGAAAAAGAGCTTGTTGAACTTAATAAGAGGTGCAAGGAAACACTTGTTAGGACAAAGCAGGAGGGAAGGTTGCAGTTATTGATTATAATTTTGCCTGATTTTAAGGGTAGATCATATGATAAGATAAAGCGTGTATGTGAGACTGAATTGGGAATAATTTCCCAATGCTGTCAACCCAAACAAGCAATAAAGATGAATAAACAATATCTTGAAAATTTGTCTTTAAAAATCAATGTCAAGTGTGGAGGCCGTAACACGGTGTTGAATGATGCATTTGAGAAAAGAATTGCCCTTGTAAGTGATAGACCAACAATAATATTTGGTGCTGATGTAACACATCCTCAGCCAGGAGAAGACTCAAGTCCTTCTATAGCTGCAGTGGTTGCATCAATGGATTGGCCTTGGGTCACAAAGTATAGGGGAATTGTTTCTGCGCAGAATCATCGTGAGGAGATAATTCAAGATCTTTATAAAACAATAGTGCATCCGCAGAAGGGAGTTCAGTTTGGTGGCATGATAAGGGAGTTAATCTTGGCTTTTCACAAATCAACTAGGCTTAAGCCTGCGAGGATTATATTTTACAGAGATGGAGTAAGTGAGGGACAGTTCAGTCAGGTTTTGCTTTATGAAATGGATGCAATTCGGAAGGCTTGTAACTCAATAGAGGAAGGGTATCTACCTCCAGTGACTTTTGTAGTGGTCCAAAAGAGACATCACACTCGTCTCTTTCCTCTCAACGAAAGAGAGACAGATAGAAGTGGAAATATTATGCCAGGGACTGTGGTAGACACCAGCATTTGCCACCCTAGGGAATTTGATTTCTATCTTAACAGCCATGCTGGAATTCAGGGGACTAGTCGACCAACGCATTACCACGTGTTGTTTGATGAAAATAGGTTCACTGCAGATCAGCTTCAGAGCTTTACTAATAACTTATGCTACACCTATGCAAGGTGTACTCGATCTGTATCAATAGTTCCTCCAGCTTATTATGCACACTTGCTAGCTTTCCGCGCAAGATACTACATCAGTGAAGTCGAAAATTCTGATTCTGGGTCTGCAAGTGGGAATAGGAATGCCACCAACGTTGCGCCGACGCCGATCCTGCCATCTGTTTTGGATAACATCAAAGATGTAATGTTTTACTGTTGA 2901 0.4285 MSRRGGGNHSENRRSQPSPAHSQQSSVNAAGSGRGSGGRGSRGGRTAGPPPSYAPAPVTSPPSVAAVRPSVAAPVASSSSAPISIESLTAEVQQKVTLESAPSSQKAVRFPNRPGYGQLGRKIQVRANHFQLRVGDKDLHHYDVSISPEITSKKVCREIINQLVKMYKESQLDNRIPAYDGSKSLYTAGPLPFTSKVFVVNLTDENRGSSSDSERKKRDREFKVTIKFATKPDLYHLTQFLRRLQLDCPYNTIQALDIALRATSSEKYIVAGRSFFSPSLGQPGPLGGGTEYYRGFYQSIRPTQMGLSLNIDVSSRAFYEPILVTEFVRKHFNLNFSRALSDQDRLKIRKVLRGVKVRLSHSGKIRSCKVAGLSREPLKDLTFTLEDNANRKKVIDYFHEKYNIVLKYPLLPALQAGTDSRPTYFPMELCQIEPGQRYSKRLNEEQVTALLKATCQRPPQRESDIKHIVMQHRFNADNVAKEFGINVREELALVDARVLPPPTLKYCGTGSESKIDPRMGAWNMINKKMVDAGKVQFWTCVCFSQRMDPTQFCDQLVNMCQSRGMRFNPDPLVPIFPGNPNQIEKELVELNKRCKETLVRTKQEGRLQLLIIILPDFKGRSYDKIKRVCETELGIISQCCQPKQAIKMNKQYLENLSLKINVKCGGRNTVLNDAFEKRIALVSDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGIVSAQNHREEIIQDLYKTIVHPQKGVQFGGMIRELILAFHKSTRLKPARIIFYRDGVSEGQFSQVLLYEMDAIRKACNSIEEGYLPPVTFVVVQKRHHTRLFPLNERETDRSGNIMPGTVVDTSICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENRFTADQLQSFTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYISEVENSDSGSASGNRNATNVAPTPILPSVLDNIKDVMFYC 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi750g00007 966 Pfam PAZ domain 347 450 IPR003100 GO:0005515
Vivi750g00007 966 Pfam N-terminal domain of argonaute 121 260 IPR032474 -
Vivi750g00007 966 ProSiteProfiles PAZ domain profile. 322 434 IPR003100 GO:0005515
Vivi750g00007 966 FunFam Argonaute 10 498 672 - -
Vivi750g00007 966 Pfam Argonaute linker 2 domain 460 506 IPR032472 -
Vivi750g00007 966 SMART Piwi_a_2 609 927 IPR003165 GO:0003676
Vivi750g00007 966 CDD PAZ_argonaute_like 324 432 - -
Vivi750g00007 966 SMART DUF1785_2 269 321 IPR014811 -
Vivi750g00007 966 SUPERFAMILY Ribonuclease H-like 603 928 IPR012337 -
Vivi750g00007 966 CDD Piwi_ago-like 478 926 IPR045246 -
Vivi750g00007 966 SUPERFAMILY PAZ domain 317 469 IPR036085 GO:0005515
Vivi750g00007 966 MobiDBLite consensus disorder prediction 1 64 - -
Vivi750g00007 966 Pfam Piwi domain 610 926 IPR003165 GO:0003676
Vivi750g00007 966 Gene3D - 679 966 IPR036397 GO:0003676
Vivi750g00007 966 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 103 928 - -
Vivi750g00007 966 ProSiteProfiles Piwi domain profile. 609 927 IPR003165 GO:0003676
Vivi750g00007 966 FunFam protein argonaute 10-like 678 966 - -
Vivi750g00007 966 Gene3D - 498 673 - -
Vivi750g00007 966 Pfam Mid domain of argonaute 517 592 IPR032473 -
Vivi750g00007 966 MobiDBLite consensus disorder prediction 11 32 - -
Vivi750g00007 966 Gene3D paz domain 316 438 - -
Vivi750g00007 966 Pfam Argonaute linker 1 domain 272 320 IPR014811 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi750g00007 58 966 Eukaryotic Initiation Factors Gene Family AT1G48410 56.471 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi750g00007 K11593 - qsa:O6P43_028455 1201.42