Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00044 ATGTCGGATTCTACTACTCCTCTCATGAGTTTGAAGGTGCTCATTTTAGCAGGAATTTTCCTCATCATCGTAATAATCATCGTGCTTCTGATATTCCTCTGCTTTCGCGGGAACCGAAGCTGCAAGAAACGGAAGATGTTACCGAAGCTGCACAGCTCCGGTACGACTCCTCTGGTTTCGAAGGAGATCGCCGTGGTTAGGGAGATTGATCTCACGCGCTCCACTGAAAAACAGACGCGGATTGAGATTATTGAAGATGATGGTGATTGTCCGAAGAAGGAGGCAGAGATGAAGGTTGAAATTGGAGTTGTTAGGAAAAGTGACGTGTCGTGTGGGACCTACATGCAGGAGGATCCAAACATAGGGTGGGGTAGGTGGTATAGTTTAAAGGAAGTCGAAAATGCGACACGTGGATTTGCGGAAGGGAATGTGATTGGTGAAGGAGGATATGGAGTTGTTTATAGAGGTGTTTTGGAAGATGGTTCTGTTGTTGCTGTCAAGAATCTTCACAACAACAAGGGTGAAGCTGAGAAGGAGTTTAAAGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTAGTTCGTTTAGTAGGATATTCTGCAGAAGGTGCTAGAAGGATGCTTGTTTATGAATATGTTGAGAATGGAAATTTGGAGCATTGGCTGCATGGTAATGTAGGACCAGTTAGTCCCTTGACATGGGACATTCGAATCAAGATTGCTATAGGGACTGCAAAAGGGCTAAGCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACAGAGATATAAAATCCAGTAACATCCTTTTGGACAAAAACTGGAATGCGAAAGTTTCGGATTTTGGACTTGCCAAGCTCTTAGGATCTGAGAAAACTCATGTAACAACGCGTGTAATGGGAACATTTGGATATGTTTCCCCTGAGTATGCAAGCACGGGTATGCTTAATGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACAGGAAGAAGTCCTATTGATTATTCAAAACCACCAGGAGAGATGAATTTGGTTGATTGGTTTAAGGCGATGGTAGCAAGTCGTCGCAGCGATGAACTAGTTGATCCTCTGATTGAGATTCCACCTTCTCCGAGATCTCTGAAGCGGATTTTACTGATCTGTCTACGCTGTATAGACTTGGATGTCATCAAGCGACCGAAGATGGGTCAAATTGTTCATATGCTTGAGTCAGACGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGTGCCTTCTCAAGCAGATGTTTCCATTAAAGTTCCATATCCTCGGAAGCATATAGAACCCGCGGAAAAATCAATGCCTAGATGA 1371 0.4333 MSDSTTPLMSLKVLILAGIFLIIVIIIVLLIFLCFRGNRSCKKRKMLPKLHSSGTTPLVSKEIAVVREIDLTRSTEKQTRIEIIEDDGDCPKKEAEMKVEIGVVRKSDVSCGTYMQEDPNIGWGRWYSLKEVENATRGFAEGNVIGEGGYGVVYRGVLEDGSVVAVKNLHNNKGEAEKEFKVEVEAIGKVRHKNLVRLVGYSAEGARRMLVYEYVENGNLEHWLHGNVGPVSPLTWDIRIKIAIGTAKGLSYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSKPPGEMNLVDWFKAMVASRRSDELVDPLIEIPPSPRSLKRILLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSVPSQADVSIKVPYPRKHIEPAEKSMPR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00044 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Vivi74g00044 456 CDD STKc_IRAK 145 411 - -
Vivi74g00044 456 Pfam Protein kinase domain 141 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi74g00044 456 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Vivi74g00044 456 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Vivi74g00044 456 PANTHER OS01G0323000 PROTEIN 4 429 - -
Vivi74g00044 456 SUPERFAMILY Protein kinase-like (PK-like) 120 411 IPR011009 -
Vivi74g00044 456 SMART serkin_6 139 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi74g00044 456 FunFam Probable serine/threonine-protein kinase At1g01540 119 214 - -
Vivi74g00044 456 FunFam Putative receptor-like serine/threonine-protein kinase 215 425 - -
Vivi74g00044 456 Gene3D Phosphorylase Kinase; domain 1 112 214 - -
Vivi74g00044 456 ProSiteProfiles Protein kinase domain profile. 139 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi74g00044 85 411 Receptor kinase-like Gene Family AT4G02010 44.713 6.20e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vivi74g00044 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00044 - - tpra:123913149 715.687