Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00035 ATGCTTCTTTCATGTCAAAATCACACTCTTTACCTTCCTTCTTCTTCTATCCATTCCTCAAAGAACTCAAAACCCAACATTATCATCAATTGCCAAAACCCAAATGAACAAAACCAAAACCAACCCATTCCCAGAAGACACAATTCAAAATCTACATCCTTTCTCATCCACCATCTTTCACACAAAAACAGCGACAATCCTCACCCTTCACCTACCGAGCTACAAGACCCAACACCGCACGAAGAAAAAGTGAAGCTTTTAGAACTTTCCTTAGTAAGAAAAAGAACCCCACAATTTCCTGGTTCAATTTATGCCCAATCCCCTTCCGACTCTGATGTGGGTTCTTCTCTTCCTCCTCTTCGTACCCTTTTTAAATCGCGTGATGAAGAAGAAGAAGAGGTCATGATTATGAAAGCTCTTGAAATTCGTAGGAAGGTTACTCAAGAGGTTTTCAAAGAAGCTATGATAAAGGGTAAATTTGGAATTACTTATATAGAGAATTTGGTTTCTAGGTTGGGTGGTTTCATTGATTTTGTTATGATTGAAGCTGCTAACTTGAAAAGATTGCCTCAATATTCTCATTCTAGTTTCAATTTACGCGCCAAAACTGTTATTGAAGATTCTCAAGTTGTGCAACTTGTTAGATGGTTGAAGCATAATTCTCTATCGTATCCTCAAATAGCTAAGCTGATTTTGATGTCGAGGGGGAAACTTGAGTCCATAAGGAACCGTAGTGAGTGGTTGAAGTCGGTGCTCGTTAAGGGGGACTTTATTGGGGAGGCAATGTTGAAGGGTGGAGATAATATTTTGCTGCGGAGTGATAGGGAACTTGATGAGATTGTTGAGTGTTTAGAGTCCAATGGTGTAAGGAGGGAATGGATGGGATATGTTGTGAGTCGGTGTCCGAAGTTGTTATCGTACAGCTTGGAAGAAGTGAAGATCCGTGTGCAGTTCTATCTGGATATGGGTCTAGATGAGAAGGATTTCGGTACCATGGTTTTCGATTTTCCTAAAGCACTTGGTTACTATACTCTGGAAGAAATGAACCGAAAGGTTGATTACTTGAAAGAATTCGGGCTTGATAGTAAGGATGTTGGTAAGTTGCTTGCATTTAGGCCACAATTAATGGCGTGCAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACCCGAGATGGGATGAAGAGAATGCTTACCATTAAACCAATGGTCTTTTGTGTTGACTTGGAGATGACTATTGTGCCAAAGGTAAAGTTTTTTCAGGACCTAGGTGTTCGAAATGACGGGATTGCTAACATGCTTGTAAAATTTCCTACCCTACTCACCTACAGCCTGCACAAGAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGAAGAATCTATTGCAAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAGCATAGTACATAAGCTCGAAGTAAATGTAAAATATCATTTGTCTCTTGGCATACGTCTTCGGCAACTGGGTGAAATGGTCGCTGATTTCCCAATGCTGCTGAGATATAATATAGATGTTCTGCGTCCTAAGTATATTTATTTGCGGAAAACTATGGTCCGAACTTTACAAGATCTCATTCAGTTTCCGAGGTTTTTCAGCTATTCCCTCGAGGGTCGAATAATCCCAAGACACAAGGTTCTGGTGGAGAATCAGATAAATGTCAAGCTAAAATGCATGTTAGCTTGTACAGATGAAGAATTTAACAAAATGGTCAAGAATATGATTCAAAAACGCCACAAATGTCAATCTACTGTCATGAAGGAGAATAATCCGCATCCCCAGTCTCACGCTACTGGGGATATTACTACACACCAGACGTAA 1884 0.4039 MLLSCQNHTLYLPSSSIHSSKNSKPNIIINCQNPNEQNQNQPIPRRHNSKSTSFLIHHLSHKNSDNPHPSPTELQDPTPHEEKVKLLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFKSRDEEEEEVMIMKALEIRRKVTQEVFKEAMIKGKFGITYIENLVSRLGGFIDFVMIEAANLKRLPQYSHSSFNLRAKTVIEDSQVVQLVRWLKHNSLSYPQIAKLILMSRGKLESIRNRSEWLKSVLVKGDFIGEAMLKGGDNILLRSDRELDEIVECLESNGVRREWMGYVVSRCPKLLSYSLEEVKIRVQFYLDMGLDEKDFGTMVFDFPKALGYYTLEEMNRKVDYLKEFGLDSKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMKRMLTIKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIANMLVKFPTLLTYSLHKKIRPVVIFLMTKAGVTEESIAKVVALGPELLGCSIVHKLEVNVKYHLSLGIRLRQLGEMVADFPMLLRYNIDVLRPKYIYLRKTMVRTLQDLIQFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDEEFNKMVKNMIQKRHKCQSTVMKENNPHPQSHATGDITTHQT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00035 627 Gene3D Transcription termination factor 3, mitochondrial 370 600 IPR038538 -
Vivi74g00035 627 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 295 325 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 475 506 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 543 574 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 438 470 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 SMART mt_12 511 541 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 MobiDBLite consensus disorder prediction 13 71 - -
Vivi74g00035 627 Pfam mTERF 223 356 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 Pfam mTERF 282 588 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 PANTHER CGI-12 PROTEIN-RELATED 226 368 IPR003690 GO:0003690|GO:0006355
Vivi74g00035 627 MobiDBLite consensus disorder prediction 607 627 - -
Vivi74g00035 627 MobiDBLite consensus disorder prediction 13 79 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi74g00035 mTERF 3.7e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00035 K15031 - qsa:O6P43_001902 862.448