Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00029 ATGTTACACTGTCTCAACACTTCGGGTAATCTAACAGGAGGAGAAACAACCATTTCCGACATGACACTATTACAAACACAAAAACCAACAATCAACTTTCAACAATTCTCTTCTTCTTCTTCTCCTCCACAGTTTATGATGGTTGCTTGCGATTCCGCTCTTGGCGAAGTCGTTGCTAATAATGGATTCGGAAAAGATAGCATTAAGAAAAGAAAAGCCGAAATTAACAATAACAATAATAATTCTAAGGTTGTTGTTAATCATGACAAGAGGATCAAAGTGAGTACAGAAGAAGAGGAATCAAAAACCAGTGAGCAAATTACAAAGACACACAAGACTACAAAGTCCAACAATGGAACAAAAAGAGAAAACTCTGGTGATACTAATTCTAAGGAAAAGCTTGATTACATTCATGTTCGAGCGCGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCAGAAAGAGTTAGAAGGGAAAAGATAAGTGAGAGGATGAAGTATTTACAAGATTTAGTGCCGGGATGCAACAAAATTGCAGGAAAAGCTGGAATGCTTGATGAAATTATTAACTATGTTCAATCTCTTCAGAGACAAGTTGAGTTCTTGTCAATGAAATTAGCAGCTGTAAATCCAAGACTTGACTTCAACATTGATGAATTGTTTGCCAAAGAGATTTTTCCCCAAAATTTTCCAACCATAGGGATGCAATCAGACATGACTAACCCTACATATCTTCAATTCAATTCAGCGCAACAATTACTTTCGAGTTGTGGTGGACTAATAAACAATATGGGGATGATCCCTCCGGAAATCGGGCATCGCAGGAACATGAATATCCCCACCTCTACCTCTTTACCTGAAATCTTTGACTCGTCATGTTTCACCCATATTTTACCCTCTTCAACTTGGGAAGGTGATTTTCAAAACCTTCACAGTGTGGATTTTGATCAAGGAAGATCAATGTCCTTTCCTTCTCAGCCATTCACAGGTATCTACCAATTTATGACATGTCAAATCACTTTTTTTCTTAGGCAGCTATCATAG 1044 0.3793 MLHCLNTSGNLTGGETTISDMTLLQTQKPTINFQQFSSSSSPPQFMMVACDSALGEVVANNGFGKDSIKKRKAEINNNNNNSKVVVNHDKRIKVSTEEEESKTSEQITKTHKTTKSNNGTKRENSGDTNSKEKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEIFPQNFPTIGMQSDMTNPTYLQFNSAQQLLSSCGGLINNMGMIPPEIGHRRNMNIPTSTSLPEIFDSSCFTHILPSSTWEGDFQNLHSVDFDQGRSMSFPSQPFTGIYQFMTCQITFFLRQLS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00029 347 CDD bHLH_AtBPE_like 135 220 - -
Vivi74g00029 347 MobiDBLite consensus disorder prediction 86 109 - -
Vivi74g00029 347 FunFam Basic helix-loop-helix transcription factor 142 214 - -
Vivi74g00029 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 195 IPR011598 GO:0046983
Vivi74g00029 347 Gene3D - 142 216 IPR036638 GO:0046983
Vivi74g00029 347 Pfam Helix-loop-helix DNA-binding domain 149 196 IPR011598 GO:0046983
Vivi74g00029 347 SMART finulus 151 201 IPR011598 GO:0046983
Vivi74g00029 347 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 252 IPR024097 GO:0006355
Vivi74g00029 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 214 IPR036638 GO:0046983
Vivi74g00029 347 MobiDBLite consensus disorder prediction 110 124 - -
Vivi74g00029 347 MobiDBLite consensus disorder prediction 79 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi74g00029 63 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 43.682 1.72e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi74g00029 HLH 3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00029 - - vvo:131632228 655.595