Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00028 ATGTTACACTGTCTCAACACTTCGGGTAATCTAACAGGAGGAGAAACAACCATTTCCGACATGACACTATTACAAACACAAAAACCAACAATCAACTTTCAACAATTCTCTTCTTCTTCTTCTCCTCCACAGTTTATGATGGTTGCTTGCGATTCCGCTCTTGGCGAAGTCGTTGCTAATAATGGATTCGGAAAAGATAGCATTAAGAAAAGAAAAGCCGAAATTAACAATAACAATAATAATTCTAAGGTTGTTGTTAATCATGACAAGAGGATCAAAGTGAGTACAGAAGAAGAGGAATCAAAAACCAGTGAGCAAATTACAAAGACACACAAGACTACAAAGTCCAACAATGGAACAAAAAGAGAAAACTCTGGTGATACTAATTCTAAGGAAAAGCTTGATTACATTCATGTTCGAGCGCGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCAGAAAGAGTTAGAAGGGAAAAGATAAGTGAGAGGATGAAGTATTTACAAGATTTAGTGCCGGGATGCAACAAAATTGCAGGAAAAGCTGGAATGCTTGATGAAATTATTAACTATGTTCAATCTCTTCAGAGACAAGTTGAGTTCTTGTCAATGAAATTAGCAGCTGTAAATCCAAGACTTGACTTCAACATTGATGAATTGTTTGCCAAAGAGATTTTTCCCCAAAATTTTCCAACCATAGGGATGCAATCAGACATGACTAACCCTACATATCTTCAATTCAATTCAGCGCAACAATTACTTTCGAGTTGTGGTGGACTAATAAACAATATGGGGATGATCCCTCCGGAAATCGGGCATCGCAGGAACATGAATATCCCCACCTCTACCTCTTTACCTGAAATCTTTGACTCGTCATGTTTCACCCATATTTTACCCTCTTCAACTTGGGAAGGTGATTTTCAAAACCTTCACAGTGTGGATTTTGATCAAGGAAGATCAATGTCCTTTCCTTCTCAGCCATTCACAGGTATGGTTGAAGCTAGCAATTTGAAGATGGAGATGTAA 1026 0.3821 MLHCLNTSGNLTGGETTISDMTLLQTQKPTINFQQFSSSSSPPQFMMVACDSALGEVVANNGFGKDSIKKRKAEINNNNNNSKVVVNHDKRIKVSTEEEESKTSEQITKTHKTTKSNNGTKRENSGDTNSKEKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEIFPQNFPTIGMQSDMTNPTYLQFNSAQQLLSSCGGLINNMGMIPPEIGHRRNMNIPTSTSLPEIFDSSCFTHILPSSTWEGDFQNLHSVDFDQGRSMSFPSQPFTGMVEASNLKMEM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00028 341 Gene3D - 142 216 IPR036638 GO:0046983
Vivi74g00028 341 CDD bHLH_AtBPE_like 135 220 - -
Vivi74g00028 341 MobiDBLite consensus disorder prediction 86 109 - -
Vivi74g00028 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 195 IPR011598 GO:0046983
Vivi74g00028 341 Pfam Helix-loop-helix DNA-binding domain 149 196 IPR011598 GO:0046983
Vivi74g00028 341 SMART finulus 151 201 IPR011598 GO:0046983
Vivi74g00028 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 214 IPR036638 GO:0046983
Vivi74g00028 341 FunFam Basic helix-loop-helix transcription factor 142 214 - -
Vivi74g00028 341 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 252 IPR024097 GO:0006355
Vivi74g00028 341 MobiDBLite consensus disorder prediction 110 124 - -
Vivi74g00028 341 MobiDBLite consensus disorder prediction 79 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi74g00028 63 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 43.682 9.97e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi74g00028 HLH 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00028 - - vvo:131632228 622.083