Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00021 ATGCAACCTTTCAGCACAGAAATGCATTCTCTTAACTCCCTTTTCAACTCCTCTTCTTCTCCTCAAATCCCCATTCCTCTCCCCAATCACCACCAACACACCAACAACGACACAGAAGATTTTCTCAAACAAATGCTCTCCAATCTTTCTCCTCCCTCTCCCTGGACCATCCACCCTAATTCCGACGAGCATTTCACTTTCCCTTATGATCAACAAACCAACCTCGCCTCCAACAACCACCAGATCACTGTTAAAACCATCCCCGCCCATCCCGCTGACTTTGACGCCCTTTTACAGACTGGTGACGGTTCCGTTCAAGATATCTATAACGGCCTCTCTGGATTTCTCCACAATCAACCTCCTCAGGTCCAAAATATTGGAGGTGGTTCAGTGAGTGCAACGAACCAAGCTCCGGTGGCTCAACCGAAGCAGAAAGTTAGGGCTAGGAGAGGACAGGCCACTGATCCACACAGCATCGCCGAGAGGTTAAGGAGGGAAAGAATAGCTGAAAGAATGAAATCATTGCAAGAGCTTGTTCCAAATGCAAATAAGACAGATAAGGCCTCCATGCTGGATGAGATCATTGATTATGTCAAGTTCCTAAAGGTTCAAGTCAAGGTTTTGAGCGTGAGTAGATTAGGCGGAGCTGCAGCGGCCGCTCCTCTTGTAGCTGATATGTCCTCCGAGGGTGTCAGTGACTGCGTCCAAGCCAACGGCGGCAACGCTGGGCTCCACCCTAAAACGTCGTCGTCGAACGAGAGTCTCACAATGACGGAGCATCAGGTGGCGAAGCTTATGGAGGAAGACATGGGATCCGCCATGCAATACTTGCAGGGCAAAGGCCTCTGCCTCATGCCTATTTCTCTCGCCACTGCAATCTCCACTGCCACGTGTCACACCAGGAACCCTTTGATTAACGGTGATGGGCCATCTTCTCCCGGAATGTCCGTTAACAGCATAGTCAAAGATGCTAACTCTGCTTCTAATAAGTCGTAG 996 0.496 MQPFSTEMHSLNSLFNSSSSPQIPIPLPNHHQHTNNDTEDFLKQMLSNLSPPSPWTIHPNSDEHFTFPYDQQTNLASNNHQITVKTIPAHPADFDALLQTGDGSVQDIYNGLSGFLHNQPPQVQNIGGGSVSATNQAPVAQPKQKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLKVQVKVLSVSRLGGAAAAAPLVADMSSEGVSDCVQANGGNAGLHPKTSSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINGDGPSSPGMSVNSIVKDANSASNKS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00021 331 MobiDBLite consensus disorder prediction 304 331 - -
Vivi74g00021 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 210 IPR036638 GO:0046983
Vivi74g00021 331 FunFam Transcription factor bHLH66 149 214 - -
Vivi74g00021 331 SMART finulus 158 207 IPR011598 GO:0046983
Vivi74g00021 331 MobiDBLite consensus disorder prediction 1 36 - -
Vivi74g00021 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 293 - -
Vivi74g00021 331 MobiDBLite consensus disorder prediction 1 32 - -
Vivi74g00021 331 Gene3D - 146 208 IPR036638 GO:0046983
Vivi74g00021 331 Pfam Helix-loop-helix DNA-binding domain 157 201 IPR011598 GO:0046983
Vivi74g00021 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi74g00021 141 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.182 1.04e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi74g00021 HLH 5.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00021 - - vvo:131623482 634.795