Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi74g00020 ATGCAACCTTTCAGCACAGAAATGCATTCTCTTAACTCCCTTTTCAACTCCTCTTCTTCTCCTCAAATCCCCATTCCTCTCCCCAATCACCACCAACACACCAACAACGACACAGAAGATTTTCTCAAACAAATGCTCTCCAATCTTTCTCCTCCCTCTCCCTGGACCATCCACCCTAATTCCGACGAGCATTTCACTTTCCCTTATGATCAACAAACCAACCTCGCCTCCAACAACCACCAGATCACTGTTAAAACCATCCCCGCCCATCCCGCTGACTTTGACGCCACTGGTGACGGTTCCGTTCAAGATATCTATAACGGCCTCTCTGGATTTCTCCACAATCAACCTCCTCAGGTCCAAAATATTGGAGGTGGTTCAGTGAGTGCAACGAACCAAGCTCCGGTGGCTCAACCGAAGCAGAAAGTTAGGGCTAGGAGAGGACAGGCCACTGATCCACACAGCATCGCCGAGAGGTTAAGGAGGGAAAGAATAGCTGAAAGAATGAAATCATTGCAAGAGCTTGTTCCAAATGCAAATAAGACAGATAAGGCCTCCATGCTGGATGAGATCATTGATTATGTCAAGTTCCTAAAGGTTCAAGTCAAGGTTTTGAGCGTGAGTAGATTAGGCGGAGCTGCAGCGGCCGCTCCTCTTGTAGCTGATATGTCCTCCGAGGGTGTCAGTGACTGCGTCCAAGCCAACGGCGGCAACGCTGGGCTCCACCCTAAAACGTCGTCGTCGAACGAGAGTCTCACAATGACGGAGCATCAGGTGGCGAAGCTTATGGAGGAAGACATGGGATCCGCCATGCAATACTTGCAGGGCAAAGGCCTCTGCCTCATGCCTATTTCTCTCGCCACTGCAATCTCCACTGCCACGTGTCACACCAGGAACCCTTTGATTAACGGTGATGGGCCATCTTCTCCCGGAATGTCCGTTAACAGCATAGTCAAAGATGCTAACTCTGCTTCTAATAAGTCGTAG 987 0.4975 MQPFSTEMHSLNSLFNSSSSPQIPIPLPNHHQHTNNDTEDFLKQMLSNLSPPSPWTIHPNSDEHFTFPYDQQTNLASNNHQITVKTIPAHPADFDATGDGSVQDIYNGLSGFLHNQPPQVQNIGGGSVSATNQAPVAQPKQKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLKVQVKVLSVSRLGGAAAAAPLVADMSSEGVSDCVQANGGNAGLHPKTSSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINGDGPSSPGMSVNSIVKDANSASNKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi74g00020 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 207 IPR036638 GO:0046983
Vivi74g00020 328 MobiDBLite consensus disorder prediction 1 36 - -
Vivi74g00020 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Vivi74g00020 328 MobiDBLite consensus disorder prediction 123 152 - -
Vivi74g00020 328 MobiDBLite consensus disorder prediction 1 32 - -
Vivi74g00020 328 MobiDBLite consensus disorder prediction 301 328 - -
Vivi74g00020 328 Pfam Helix-loop-helix DNA-binding domain 154 198 IPR011598 GO:0046983
Vivi74g00020 328 Gene3D - 143 205 IPR036638 GO:0046983
Vivi74g00020 328 SMART finulus 155 204 IPR011598 GO:0046983
Vivi74g00020 328 FunFam Transcription factor bHLH66 146 211 - -
Vivi74g00020 328 MobiDBLite consensus disorder prediction 123 138 - -
Vivi74g00020 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 290 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi74g00020 138 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.182 9.11e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi74g00020 HLH 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi74g00020 - - vvo:131623482 624.394