Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi748g00009 ATGGACAAAAAAATCATTGATAGAGAAACACATGACTTAATGAATGTTGACTCATTCTCTCAACTTCCCTTCATCCGCCCTCCACCTAAAGAAAAAGGCATCCGCCTCTTCGGCATCGAGTTCGGCGGCCGAGCAGCCGCCGATGACATCGACGACTCCTCCGAGTCTCTCGAAACAACATTCGAGGTTGAAAACAACAACACCAACAAAGACACCAACACTAACACCAACAACAGCAGCAGCAACAACAACAGCAGTAACAACAACATGGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCAACTTCACAAGCCTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACATGCAAAACGACAACACCTTCAATCAACTATGGTACATGCTACATCTTTCTCTGATCCACATCTCTACCATCATCATCATCAACAGCAACAACATCCTCTCTACAGATTCACATCATCCTCACCATCCTCATTATCATCATCACCTTCATATCCAACATGGAACTCAAACTCAGCCACTGCAAGATTCTATAACCATCCAACTTCTTCATACTCTCAACAACCTATTAATGGTAGTCCTTTAGCTTTTTGGAGAATCCCAAACGGCACCATCCAGAGTAACCCTAGTTTCAACCATGAACGTCCTCTCCCTTTACTTGCTTCCGAGGAAAGAGCGAATCCGTCTCAGGACGGATACGCACACGGAGTTCGTTCTAATGTTTCGCATAATCGCTACGTTTATGATACTAAACGTAGCGACCATGTTAGTTTAGATCTTCATCTCTAA 816 0.4301 MDKKIIDRETHDLMNVDSFSQLPFIRPPPKEKGIRLFGIEFGGRAAADDIDDSSESLETTFEVENNNTNKDTNTNTNNSSSNNNSSNNNMENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATSFSDPHLYHHHHQQQQHPLYRFTSSSPSSLSSSPSYPTWNSNSATARFYNHPTSSYSQQPINGSPLAFWRIPNGTIQSNPSFNHERPLPLLASEERANPSQDGYAHGVRSNVSHNRYVYDTKRSDHVSLDLHL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi748g00009 271 MobiDBLite consensus disorder prediction 49 91 - -
Vivi748g00009 271 SUPERFAMILY beta-beta-alpha zinc fingers 92 124 IPR036236 -
Vivi748g00009 271 MobiDBLite consensus disorder prediction 59 91 - -
Vivi748g00009 271 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Vivi748g00009 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Vivi748g00009 271 MobiDBLite consensus disorder prediction 110 132 - -
Vivi748g00009 271 MobiDBLite consensus disorder prediction 145 175 - -
Vivi748g00009 271 MobiDBLite consensus disorder prediction 155 175 - -
Vivi748g00009 271 PANTHER ZINC FINGER PROTEIN GIS 1 271 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi748g00009 1 271 C2H2 Transcription Factor Family AT3G58070 37.102 1.82e-44 149