Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi747g00001 ATGTGCAACAAGAATAGTATTACTGTTTCTCCAGCAAAGTGTAAGTCTGTTACTATGAAGAGGAAAAGGAAACCAACCTATAAAAACTCTTCTTCTTTTTCATCTTCTTCTTCATCTTCTTCTCTTAAACCACACAAACGTAGAAACAGAACCAAAACAAGAAAACCTAAGTATCTCAGTCTTCGTTTACAGCTCTCACAAACTCAAACAAACCAAACAGAAAAAACAACAACCCAACAGCAACAACAAGAATCACAATTGAATCTATTCTCTCACCACCAATCGGATTCCGACATGCAAGAAGAAAACAACGTGGCTTTACTCTTCACATCCGACGGTGGAGCGACGCTAAACGGTCTTCTGGAAGACGAATCGACAACGCTAACAGCGACGACGGCGGAGGAGGAAGAGTCGTTATCGGTGATGAGGTGTCCGGCGATGGATGGGTTGGTGAAGAAAGCGATGAGGAGGAAGAGAGACGATGAGGAGGAGAGATGGGTTAGTTACTCGGAAGTTGTGGAAGAGAAGAAGGAAATGATGGAGGAAGTGAATAGTTGTGTTGGGAGTGAAACGACGTCGTTTTTTGGGTCTTTGTCTTTGAAGCTGGATCATGATGGAATATTGAATGCTTGGTCTGATAAAGGATCTCTTTATGTTGATGCTGCTGATGAGCCTCCACAGACTGTTCCTGATTTGTTCAATGCTTCCACCATCATTCCCAATGTAATGTGGGATGGTTATGGGTGTGATGTTGTTGGGAACACATGGAAAGTTCCTGAAGGTTGTGGAGCTAACAATAACAATGTGAATGTGAAGGAAGAAATGGGTTGGAAGCTTGGGCAGAGAGAGGCAAGTTTGTTGAGATACAAAGAGAAAAGGCAAAGTAGACTCTTTGCTAAGAGGATTCGTTATGAAGTTCGCAAGTTGAATGCTGAAAAACGGCCTAGGATGAAGGGACGATTTGTGAAGAGAGAATAA 978 0.4254 MCNKNSITVSPAKCKSVTMKRKRKPTYKNSSSFSSSSSSSSLKPHKRRNRTKTRKPKYLSLRLQLSQTQTNQTEKTTTQQQQQESQLNLFSHHQSDSDMQEENNVALLFTSDGGATLNGLLEDESTTLTATTAEEEESLSVMRCPAMDGLVKKAMRRKRDDEEERWVSYSEVVEEKKEMMEEVNSCVGSETTSFFGSLSLKLDHDGILNAWSDKGSLYVDAADEPPQTVPDLFNASTIIPNVMWDGYGCDVVGNTWKVPEGCGANNNNVNVKEEMGWKLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi747g00001 325 MobiDBLite consensus disorder prediction 43 57 - -
Vivi747g00001 325 MobiDBLite consensus disorder prediction 60 87 - -
Vivi747g00001 325 Pfam CCT motif 282 324 IPR010402 GO:0005515
Vivi747g00001 325 ProSiteProfiles CCT domain profile. 282 324 IPR010402 GO:0005515
Vivi747g00001 325 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 14 325 - -
Vivi747g00001 325 MobiDBLite consensus disorder prediction 1 87 - -
Vivi747g00001 325 MobiDBLite consensus disorder prediction 28 42 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi747g00001 197 324 C2C2-CO-like Transcription Factor Family AT1G73870 43.077 7.74e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi747g00001 CCT 4.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi747g00001 - - psat:127128050 508.064