Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi743g00008 ATGAAGTCTTTTTCTCTTTTATCACCTATACTTTTACACCTTCATCTTCTTTTTCTCTTAACCTTATGTTTAATGTGCTTTAGTCCTAACAAAATTGTGGCAGTGATATTACAAAACCAAACCGATTATTTAGCATTGCTCAAATTCAAAGAATCAATATTCAATGATCCATATAGAACTCTTGATTCTTGGAATTCTTCCATCCACTTCTGCAACTGGTTTGGAATCACATGCAGCCCCATGCATCAAAGAGTTATTGAGTTGAACTTAGATGGATCTGAATTACATGGATCTTTATCTCCCTATGTTGGCAATCTCACTTATCTGAAAATTCTCTACCTAAGAAACAACAGCTTCTCTGGAGAAATTCCACAGGAGTTAGGTAAGTTGCTACAATTGCAGCAACTTCGTCTCACCAATAACTCATTTGCAGGTCAAATTCCTACAAACTTGACATATTGCTCCAATCTCGAATGGTTATCCTTGGGTAAGAACAATCTCATTGGTAAAATACCAATTGAAATTGGCTCTTTGAAAAAACTCAGAACATTAGAAGTTTGGAAAAACAAGTTAACCGGAAGAATCTCTTCATTTATAGGGAATCTTTCAAGCTTAAGGGGCTTTTCCTTTACTTATAACCACATACAAGGAGATATTCCACAAGAAATATGTCACCTCAAAAACTTGTCAGTTTTACTTTTGGGTGGGAACAAATTGTCTGGTATTGTTCCTTCTTGTCTTTACAACATATCATCACTTACCATGCTTTCCATGCCAGAGAATAACTTTCATGGCTCTCTTCCACTAAACATGTTCAACACCCTCCCCAATCTCCAACATTTTGCTATTTCAGGAAATCAATTTTCCGGTTCAATTGCCACTTCCATAATAAATGCATCTAACATTATATTGTTTGATGTCAGTGGAAATTATTTTGAGGGACAAGTTCCAAGTTTTGGCAGGCTAAAAAATTTATCTTTTTTGAATTTGGAAGACAACAATTTAGGTGACAATTCAACAAAGGATTTGGAGTTTTTAAAATCTTTGACAAACTGTAGCATGTTAAATGCGTTTTCTATGGCCACCAATAATTTTGGAGGCATTCTACCAAATTCTATAGGCAATTTATCCACTGAGCTTAAACAACTATATCTTGGGGTTAATATGATATCAGGACAAATTCCTGCTGAGTTAGGAGGTTTAGTTGGCTTAACTCTCTTGAGCATGGTAGGTAACCAATTTGAAGGAAATATTCCAACAACTTTTGGGAAGTTCCAAAAGATGCAGATGTTAGATTTGAACGGAAACAAGCTGTCAGGAGATATACCATCCTCTATAGGTAATCTTACTCAGTTGTATAAATTGGATTTACATCTTAATATGTTTGAAGGAAATATTCCTCCAAGCATAGGAAACTGTCAAAAGTTACAATATCTAGATCTTTCGCATAATAAGCTTCGAGGAACCATCCCTTTAGAGGTTTTTAATCTTTTGTCGTTAACAAATTTATTGGACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGTTAAAAAATATTGGTAAGCTAAATGTCTCTAATAATCATTTGTCGGGGGATATTCCAATATCTATTGGTGAGTGCATAAGCTTAGAATACCTTCTTTTGCAAGATAACTCCTTCAACGGAACAATACCATCCTCTTTGTCTTCTCTCAAAGGTCTTCTATATTTAGACCTTTCACTAAATCAATTGTCTGGACCAATTCCTGATGTTTTACAGAATATCTCTGGTTTGAAGTACTTGAATGTTTCTTTTAACTTGCTGGAAGGAAGGGTACCAACAGGCGGAGTCTTTAGAAATTCAACCCAAGTAGGAATGATTGGAAACAAAAAGTTTTGTGGAGGTATTTTACAACTGCGTCTACCAGCATGCCCCGTCAAGGATAGCAAGCATACAAAACACCCTAAGTTCATGTTGTTAGCAGTGATAATTGGTGTCATTTCTTTACTTTTCATAATTTCAATTTTTATAACAGTATACTGGATGAGGAAAAGAAAACCAAAACAACCTTTTGATTTACCAACAGTTTCCCAATTAGATCAGATTTCATACCGAGAGTTACACCGAGGAACTGATGGGTTCTCAACTAACAACTTGATTGGATCAGGAAGTTTTGGTACTGTGTATAGAGGAAATCTTGGGTCAGAAGATAATGTTGTTGCCGTAAAGGTCCTGAACCTCAAGAAGAAGGGAGCTCACAAGAGTTTCCTTGTTGAATGTAATGCACTCAAAAACATTAGACACCGGAATTTTGTTAAGATTTTAACATGTTGTTCTAGTTCAGATTACAAAGGTCAAGAATTTAAGGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAGCATCCAACAACATTGGACCTCAGTCATAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCAGGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCGGTCATTGATGATACCTCTCATAAGGATACAAGTACAATTGGAATAAAAGGGACTGTTGGCTACGCTCCTCCAGAGTATGGAATGGGTTATGAAATGTCTACATGTGGAGATATGTATAGCTATGGAATTCTGGTGTTGGAAATACTTACTGGTAAAAGACCCACAGATGAAGATTTTGAAGATGGCCAAAATCTGCACGACTATGTTGCAAATTCATTTCCTGATAATCTTATAAAGATTTTGGACCCAGGTCTTGTATCAAGAGATACACAAGAAAAAATGCAAGATGAAATTTGTGAGAATCTTATTCCAAGTGTTGATGAGGAGTGCTTAGTTTCACTTTTTAGGATTGGGCTTATTTGTTCAATGGAACCACCGAAGGAAAGAATGAATATTGTGGATGTCAGCAGAGAGCTTAGCAAAATCAAAAAGACTTTTTTTACTGGTGTTCGTACTCGTAATTGGTAA 3090 0.3589 MKSFSLLSPILLHLHLLFLLTLCLMCFSPNKIVAVILQNQTDYLALLKFKESIFNDPYRTLDSWNSSIHFCNWFGITCSPMHQRVIELNLDGSELHGSLSPYVGNLTYLKILYLRNNSFSGEIPQELGKLLQLQQLRLTNNSFAGQIPTNLTYCSNLEWLSLGKNNLIGKIPIEIGSLKKLRTLEVWKNKLTGRISSFIGNLSSLRGFSFTYNHIQGDIPQEICHLKNLSVLLLGGNKLSGIVPSCLYNISSLTMLSMPENNFHGSLPLNMFNTLPNLQHFAISGNQFSGSIATSIINASNIILFDVSGNYFEGQVPSFGRLKNLSFLNLEDNNLGDNSTKDLEFLKSLTNCSMLNAFSMATNNFGGILPNSIGNLSTELKQLYLGVNMISGQIPAELGGLVGLTLLSMVGNQFEGNIPTTFGKFQKMQMLDLNGNKLSGDIPSSIGNLTQLYKLDLHLNMFEGNIPPSIGNCQKLQYLDLSHNKLRGTIPLEVFNLLSLTNLLDLSHNSLSGSLPREVGMLKNIGKLNVSNNHLSGDIPISIGECISLEYLLLQDNSFNGTIPSSLSSLKGLLYLDLSLNQLSGPIPDVLQNISGLKYLNVSFNLLEGRVPTGGVFRNSTQVGMIGNKKFCGGILQLRLPACPVKDSKHTKHPKFMLLAVIIGVISLLFIISIFITVYWMRKRKPKQPFDLPTVSQLDQISYRELHRGTDGFSTNNLIGSGSFGTVYRGNLGSEDNVVAVKVLNLKKKGAHKSFLVECNALKNIRHRNFVKILTCCSSSDYKGQEFKALVFDYMKNGSLEQWLHPEILNAEHPTTLDLSHRLNIIIDVASALHYLHQECEQLVIHCDLKPSNVLLDDDMVAHVSDFGIARLVSVIDDTSHKDTSTIGIKGTVGYAPPEYGMGYEMSTCGDMYSYGILVLEILTGKRPTDEDFEDGQNLHDYVANSFPDNLIKILDPGLVSRDTQEKMQDEICENLIPSVDEECLVSLFRIGLICSMEPPKERMNIVDVSRELSKIKKTFFTGVRTRNW 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi743g00008 1029 Gene3D Phosphorylase Kinase; domain 1 685 794 - -
Vivi743g00008 1029 SUPERFAMILY L domain-like 40 335 - -
Vivi743g00008 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1025 - -
Vivi743g00008 1029 Gene3D Ribonuclease Inhibitor 354 643 IPR032675 -
Vivi743g00008 1029 Pfam Protein kinase domain 714 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00008 1029 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 352 1015 - -
Vivi743g00008 1029 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Vivi743g00008 1029 SMART LRR_sd22_2 425 451 - -
Vivi743g00008 1029 SMART LRR_sd22_2 570 596 - -
Vivi743g00008 1029 SMART LRR_sd22_2 226 252 - -
Vivi743g00008 1029 SMART LRR_sd22_2 473 494 - -
Vivi743g00008 1029 SMART LRR_sd22_2 178 204 - -
Vivi743g00008 1029 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 79 344 - -
Vivi743g00008 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Vivi743g00008 1029 ProSiteProfiles Leucine-rich repeat profile. 475 496 IPR001611 GO:0005515
Vivi743g00008 1029 Gene3D Ribonuclease Inhibitor 269 353 IPR032675 -
Vivi743g00008 1029 SUPERFAMILY L domain-like 379 633 - -
Vivi743g00008 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 345 649 - -
Vivi743g00008 1029 SMART LRR_typ_2 570 593 IPR003591 -
Vivi743g00008 1029 SMART LRR_typ_2 106 130 IPR003591 -
Vivi743g00008 1029 SMART LRR_typ_2 522 546 IPR003591 -
Vivi743g00008 1029 SMART LRR_typ_2 449 473 IPR003591 -
Vivi743g00008 1029 SMART LRR_typ_2 474 497 IPR003591 -
Vivi743g00008 1029 SMART LRR_typ_2 226 249 IPR003591 -
Vivi743g00008 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 794 - -
Vivi743g00008 1029 Gene3D Ribonuclease Inhibitor 193 254 IPR032675 -
Vivi743g00008 1029 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Vivi743g00008 1029 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Vivi743g00008 1029 Pfam Leucine rich repeat 180 239 IPR001611 GO:0005515
Vivi743g00008 1029 SMART serkin_6 713 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00008 1029 SUPERFAMILY Protein kinase-like (PK-like) 688 1013 IPR011009 -
Vivi743g00008 1029 Gene3D Transferase(Phosphotransferase) domain 1 795 1024 - -
Vivi743g00008 1029 ProSiteProfiles Protein kinase domain profile. 713 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00008 1029 Gene3D Ribonuclease Inhibitor 39 192 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi743g00008 39 1029 Receptor kinase-like Gene Family AT3G47570 44.611 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi743g00008 Pkinase 1.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi743g00008 - - gmx:100801459 1217.99