Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi743g00007 ATGTTTCCAACATTTTCATTTTGGTTATCTCTTCTCTTTGCTTTCAACTTAGTCCAAAGCACAATTACCTCTACATTAGGAAACATAACAGATAACTCGGCATTGCTCAAGTTCAAAGAATCAATATCTAATGACCCATTTGAAATCTTGAACTCTTGGAACACTTCAACTCACTACTGTAATTGGGACGGAGTTACATGTAGTCCCAAGCATCAAAGAGTTATAGAGTTAAACTTAGAAGGGTATAAGTTGCGTGGATCCATATCTCCCCATGTTGGCAACCTCTCTTTTTTGATAACTCTCAACCTTGCAAACAATAGTTTCTTTGGAAAAATCCCACAAGAACTTGGTCGGTTGTTCCGATTACAGGAACTCTTAATTACCAATAGCCCCATGACTGGGGAGATTCCGAATAACTTGACAAGCTGCACTGATCTTGAATTCTTGTTCTTATCTGGAAATCATTTGACTGGTAATATACCAAATGGAATCAGTTCTCTTCATAAGCTTGAGATTTTGGACATTTCAAATAACAAGTTAAACGGAAGAATTCCACCTTTCATAGGAAATTTTTCATCCCTAGAAACTCTTGCAATGGATATGAATAACTTAGAGGGAGATATTCCACCGGAAATTTGTGGCCTCAAAAACTTGACAATATTGGGAATGCTTGACAATAGACTATATGGTACGTTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTAAGATCACGGCTGGATTAAATGAATTTCATGGATCTCTTCCACCCAATATGTTCAACACCCTCTCCAATCTTCAATATTTAGCAATTGGAGGAAATCAACTATCAGGTAAAATCCCTACTTCCCTTGCAAATGCTTCTGCTATACAAATACTAGACTTATCTCGACAAAACAAATTGGTCGGACAAGTTCCAAGTCTAGGAAAGTTATATGATCTTCAAGTGCTAAGTCTAGAAGTAAACAGTTTAGGTGACAATTCAACTGAAGATTTGAAGTTTCTAAAAACTTTGACAAACTCTAGTAAACTAAGAGTGCTTTCTATATCTACTAATAAATTTGGAGGTAACTTGCCAAATTTAGTAGGAAATTTATCCACTCGACTTAGTCAACTATATCTTGGGGGTAACCAGATATCAGGAAAAATTCCAGCAGAATTAGGAAATCTAAATGGCTTAATTCTCTTGAGTATGGACCTTAACCATTTTGAGGGAGTTATTCCTACTACATTTGGGAAGCTTGAGAGAATGCAAAAATTAGTATTGGACGGAAATAAGCTGTCGGGAGAGTTACCACCCATCATAGGCAACCTCAGTCAATTATATTTCTTGAGTTTAAGAGATAATATGTTAGAAGGAAACATTCCTTCAAGCATAAGTAATTGCCAAAATCTACAATACCTAGACCTTTCACAAAACACTCTTAGAGGAACCATACCCTTAGAGGTCTTTAGTCTTTCCTCTTTAACAAACTTGCTCAACTTGTCAAAAAACTCGTTGAATGGTAGCTTACCGAGTGAAGTGGGTAGGCTAAAAAGTATCAACAAGTTGGATGTCTCAGAGAATCATCTATCTGGTGACATTCCTGTAGCCATTGGTGAATGCATAAGCTTAGAATACCTCTTTTTTCAAGGGAACTCCTTCAATGGAACCATACCATCCTCTTTGGCTTCACTAAAAGGTCTTCAATACTTAGACTTGTCAAGAAATCAGTTGTCTGGACCGATTCCTAATGTCCTACGGAATATATCAGGTTTAGTATACTTGAATGTTTCGTTTAACATGTTGGAAGGTGAGGTACCAACAGAAGGAGTCTTTGGAAATGTAAGTGAGTTAGATACGACTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGTTTCATCTACAACCATGCCATGTCAAAGGTAAGAAATCTGCAAAACATCACAAAACCATGCTGATAGCAGTGATAGTTAGTGTGGTATCTATTCTTCTCGCGATGACAGCAACTATCATAACTATTTATTTGATGAGGACTCAGAACAAGAAACAATACTCTGACTCACCAACAATTGACACGCTAGCCAAGGTTTCATACAAAGAGCTTCACCAAGGAACTGATGGTTTTTCTGCTAGAAACTTGGTTGGATCAGGAAATTTTGGATCTGTGTACAAAGGAAATATTTTATCACAAGATAAATATGTTGCCATAAAGGTCCTAAATCTTCAAAAGAAGGGAGCTCAAAAAAGTTTCATTACTGAATGTAATGCACTTAAAAATATGAGACATCGAAATCTGGTTAAAGTTTTGACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAGTTTAAGGCTTTGGTGTTTGAATACATGAGCAATGGAAGCTTAGAACAATGGCTACATCCCGGGATAACGAATACAGAAAATCAAAGAATGTTGAACCTTGATCAAAGATTGAATATCATTGTCGGCATTGCTTCTGTATTACATTATCTTCATTATGAATGTGAGAAATCAGTCATTCATTGTGATGTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCGCGTGAGTGATTTTGGCATAGCAAGACTTGTTTTAGCCGTTGACGGTACCTCTCACAAAGAAACTAGTACAATTGGAATTAAAGGGACGGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCCGAAATATCCACTTGTGGTGACATGTATAGCTTCGGGGTGCTTGTGTTGGAAATGCTTACCGGAAGAAGACCAACAGACGAGACGTTTGAAGATGGTCAAAATCTTCATATGTTTGTTAAAAACTCACTTCCTAGTAATCTAATACAAATTTTGGACTCACATCTTGCGCCGAGAAATGTAGAAGCAAATATAGAAGAAGATGGAAACAGTGGGAATTTGACTCCAACTGTAGAGAAATGCTTGGTTTCACTTTTTCAGATTGGACTTGCTTGTTCACTGGAATCACCAAAAGAAAGGATGAATATAGTGGATGTCACCAGAGAGTTAAGCATTATCAAAAAGGACTTCTTTAGGAAATAG 3045 0.3704 MFPTFSFWLSLLFAFNLVQSTITSTLGNITDNSALLKFKESISNDPFEILNSWNTSTHYCNWDGVTCSPKHQRVIELNLEGYKLRGSISPHVGNLSFLITLNLANNSFFGKIPQELGRLFRLQELLITNSPMTGEIPNNLTSCTDLEFLFLSGNHLTGNIPNGISSLHKLEILDISNNKLNGRIPPFIGNFSSLETLAMDMNNLEGDIPPEICGLKNLTILGMLDNRLYGTFPSCLYNMSSLTKITAGLNEFHGSLPPNMFNTLSNLQYLAIGGNQLSGKIPTSLANASAIQILDLSRQNKLVGQVPSLGKLYDLQVLSLEVNSLGDNSTEDLKFLKTLTNSSKLRVLSISTNKFGGNLPNLVGNLSTRLSQLYLGGNQISGKIPAELGNLNGLILLSMDLNHFEGVIPTTFGKLERMQKLVLDGNKLSGELPPIIGNLSQLYFLSLRDNMLEGNIPSSISNCQNLQYLDLSQNTLRGTIPLEVFSLSSLTNLLNLSKNSLNGSLPSEVGRLKSINKLDVSENHLSGDIPVAIGECISLEYLFFQGNSFNGTIPSSLASLKGLQYLDLSRNQLSGPIPNVLRNISGLVYLNVSFNMLEGEVPTEGVFGNVSELDTTGNNKLCGGISEFHLQPCHVKGKKSAKHHKTMLIAVIVSVVSILLAMTATIITIYLMRTQNKKQYSDSPTIDTLAKVSYKELHQGTDGFSARNLVGSGNFGSVYKGNILSQDKYVAIKVLNLQKKGAQKSFITECNALKNMRHRNLVKVLTCCSSTDYKGQEFKALVFEYMSNGSLEQWLHPGITNTENQRMLNLDQRLNIIVGIASVLHYLHYECEKSVIHCDVKPSNVLLDDDMVARVSDFGIARLVLAVDGTSHKETSTIGIKGTVGYAPPEYGMGSEISTCGDMYSFGVLVLEMLTGRRPTDETFEDGQNLHMFVKNSLPSNLIQILDSHLAPRNVEANIEEDGNSGNLTPTVEKCLVSLFQIGLACSLESPKERMNIVDVTRELSIIKKDFFRK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi743g00007 1014 PRINTS Leucine-rich repeat signature 560 573 - -
Vivi743g00007 1014 PRINTS Leucine-rich repeat signature 466 479 - -
Vivi743g00007 1014 SUPERFAMILY Protein kinase-like (PK-like) 679 1006 IPR011009 -
Vivi743g00007 1014 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515
Vivi743g00007 1014 ProSiteProfiles Protein kinase domain profile. 704 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 67 334 - -
Vivi743g00007 1014 PANTHER OS04G0122200 PROTEIN 98 210 - -
Vivi743g00007 1014 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Vivi743g00007 1014 SMART LRR_sd22_2 167 196 - -
Vivi743g00007 1014 SMART LRR_sd22_2 560 586 - -
Vivi743g00007 1014 SMART LRR_sd22_2 264 290 - -
Vivi743g00007 1014 SMART LRR_sd22_2 463 484 - -
Vivi743g00007 1014 SMART LRR_sd22_2 367 393 - -
Vivi743g00007 1014 Gene3D Transferase(Phosphotransferase) domain 1 786 1012 - -
Vivi743g00007 1014 SUPERFAMILY L domain-like 368 623 - -
Vivi743g00007 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 786 1014 - -
Vivi743g00007 1014 SMART serkin_6 704 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 785 - -
Vivi743g00007 1014 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Vivi743g00007 1014 Gene3D Phosphorylase Kinase; domain 1 685 785 - -
Vivi743g00007 1014 SUPERFAMILY L domain-like 30 324 - -
Vivi743g00007 1014 SMART LRR_typ_2 167 191 IPR003591 -
Vivi743g00007 1014 SMART LRR_typ_2 560 583 IPR003591 -
Vivi743g00007 1014 SMART LRR_typ_2 415 439 IPR003591 -
Vivi743g00007 1014 SMART LRR_typ_2 95 119 IPR003591 -
Vivi743g00007 1014 SMART LRR_typ_2 487 512 IPR003591 -
Vivi743g00007 1014 SMART LRR_typ_2 264 288 IPR003591 -
Vivi743g00007 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Vivi743g00007 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 639 - -
Vivi743g00007 1014 ProSitePatterns Protein kinases ATP-binding region signature. 710 733 IPR017441 GO:0005524
Vivi743g00007 1014 Gene3D Ribonuclease Inhibitor 339 635 IPR032675 -
Vivi743g00007 1014 Gene3D Ribonuclease Inhibitor 191 338 IPR032675 -
Vivi743g00007 1014 Pfam Protein kinase domain 707 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00007 1014 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi743g00007 30 1013 Receptor kinase-like Gene Family AT3G47570 44.366 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi743g00007 Pkinase 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi743g00007 - - gmx:100801459 1278.08