Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi743g00004 ATGAAATCTTTTTCTCTCTTGTCACCTATGCTTTTTCTGTTTACCTTATATTTAACGTGCTTTAATCAAAACAAAATAGTGGCAGAGACATTAGGAAACCAAACAGATTATTTAGCATTGCTTAAATTCAAAGAATCTTGGAATACTTCCATCCACTTTTGCAAGTGGCATGGAGTCACATGCAGCCCCATGCATCGAAGAGTTACTGAGTTGACCTTAATTGGATATGAGTTACATGGACCTTTGTCTCCCCATGTTGGCAATCTCATTTTTCTAAAGTATCTCATCCTCAGCAACAACACCTTCTTTGGAAGTATTCCAAATACTTTTGGAAAGTTTCCAAAGATACAAAAGCTACTTTTGAGGGAAAACAAGTTATCAGGAGATATACCACCCTTTTTAGGTAATCTTAGTCAACTGTATATATTGGATTTACATCTTAATATGTTTGATGGAAATATTCCTCCAAGCATAGGAAACTTTCAAAAGTTTCAATATCTAGATGTTTCTCATAACAAGCTTAGAGGAACCATTCCTTTAGAGGTTTTTAATCTTTTCTCTTTATCAAATTTACTAAACTTGTCACATAACTCTTTGAGTGGTAGCTTACAAGGAGAAGTGGGTAGGTTAAAAAATATTGGTAAGCTAGATGTCTCCAAGAATCATTTGTCTGGGGATATTCCAATATCTATTGGTGAATGCATAACCTTAGAATACCTTCTTTTGCAAGATAACTCATTTAACGGAACAATACCGCCTTCTTTGGCTTCCCTCAAAGGTTTTCGATATTTAGACCTTTCAAAAAACCGATTGTTTGGATCAATTCATAATGTTATACAAAATATCTCAAATTTAAAATACTTGAAGGTTTCTTTTAACATGCTGGAAGGTGAGATACCAACAGCCGGTGTCTTTGGAAATGTGACCCAAGTTGCAATGATTGGAAACAATAAGTTTTGTGGGGGTATTTCACAAATGCATCTACCACCATGCTCCATCAAGGATAGGAAACACACAAAACACCATAAGTTCATAATAGTAGTTGTTGGTGTGATTTCTTTTCTTCTCATACTTTCAATTTTTCTAACTATCTATTGGATGAGGAAAAGAAACCAAAAACCATCTTTTGATTCACCAACAATCGATCAACTAGATAAGATTTCATATCGAGACTTACATCGAGGAACTGGTGGATTCTCGAATACCAACTTGATTGGGTCAGAAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGTGTCAGAAGACAATTTTGTGGCCATAAAGGTTCTAAATCTCCAAAAGAAGGGAGCTCGCAAGAGTTTTATTCTTGAATCCAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATTATAACATGTTGTTCTAGTTCAGATTATAAAGGTCAAGAGTTCAAAGCTTTAGTTTTTCATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCGGAGACTTTAAATGAAGAGCATCAAACAACATTGGATCTCACTCACAGAGTAAATATCATTACAGATGTTGCATTGGCATTGCATTATCTTCATCAAAAATGTGAACAATTGATCCTTCATTGTGATCTAAAGCCAAGTAATGTCCTTCTTGATGATGACATGGTTGCTCATGCGGGTGATTTTGGCATAGCAAGACTTGTCTCAAACATTGGTGGTACCTCTCACAATGATACAAGTACAATTGGAATAAAAGGGGCTGTTGGCTATACTCCTCCGGAGTATGGAATGGGCTCTGAAGTGTCTACATGCGGTGACATGTATAGTTTTGGAATCCTGATGTTGGAAATGTTTATCGGTAGAAGACCTACGGATGAAGTTTTTGAAGATGGCCAAAATCTGCATGACTTTGTTGCAAATTCATTTCCTGATAATCTTATAAAGATTTTGGACCCAAGTCTTGTATCAAGAAATACAGAAGTTAAAATACAAGATGAAATTTGTGAGAATCTTATTCCAATGGTTGATGAGGAGTGTTTAATTTCACTTTTTAGGATTGGACTTATTTGTTCAAGGGAACCACCAAAGGAAAGAATGAATATTGTGGATGTCACTAAAGAGCTTAGCATAATCAGAAAAACTTTTTTCAAAGGTGAGATAAATTTATTTTTTTATGTTTACTTGAATCATTATTAA 2169 0.3476 MKSFSLLSPMLFLFTLYLTCFNQNKIVAETLGNQTDYLALLKFKESWNTSIHFCKWHGVTCSPMHRRVTELTLIGYELHGPLSPHVGNLIFLKYLILSNNTFFGSIPNTFGKFPKIQKLLLRENKLSGDIPPFLGNLSQLYILDLHLNMFDGNIPPSIGNFQKFQYLDVSHNKLRGTIPLEVFNLFSLSNLLNLSHNSLSGSLQGEVGRLKNIGKLDVSKNHLSGDIPISIGECITLEYLLLQDNSFNGTIPPSLASLKGFRYLDLSKNRLFGSIHNVIQNISNLKYLKVSFNMLEGEIPTAGVFGNVTQVAMIGNNKFCGGISQMHLPPCSIKDRKHTKHHKFIIVVVGVISFLLILSIFLTIYWMRKRNQKPSFDSPTIDQLDKISYRDLHRGTGGFSNTNLIGSESFGSVYKGNLVSEDNFVAIKVLNLQKKGARKSFILESNALKNIRHRNLVKIITCCSSSDYKGQEFKALVFHYMKNGSLEQWLHPETLNEEHQTTLDLTHRVNIITDVALALHYLHQKCEQLILHCDLKPSNVLLDDDMVAHAGDFGIARLVSNIGGTSHNDTSTIGIKGAVGYTPPEYGMGSEVSTCGDMYSFGILMLEMFIGRRPTDEVFEDGQNLHDFVANSFPDNLIKILDPSLVSRNTEVKIQDEICENLIPMVDEECLISLFRIGLICSREPPKERMNIVDVTKELSIIRKTFFKGEINLFFYVYLNHY 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi743g00004 722 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 328 - -
Vivi743g00004 722 Pfam Leucine Rich Repeat 92 113 IPR001611 GO:0005515
Vivi743g00004 722 ProSiteProfiles Protein kinase domain profile. 399 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00004 722 Gene3D Phosphorylase Kinase; domain 1 363 480 - -
Vivi743g00004 722 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 481 711 - -
Vivi743g00004 722 FunFam LRR receptor-like serine/threonine-protein kinase EFR 370 480 - -
Vivi743g00004 722 SUPERFAMILY L domain-like 42 321 - -
Vivi743g00004 722 Gene3D Transferase(Phosphotransferase) domain 1 481 711 - -
Vivi743g00004 722 Pfam Protein kinase domain 401 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00004 722 SUPERFAMILY Protein kinase-like (PK-like) 373 699 IPR011009 -
Vivi743g00004 722 PANTHER OS04G0122200 PROTEIN 78 703 - -
Vivi743g00004 722 SMART serkin_6 399 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00004 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Vivi743g00004 722 FunFam Nuclear pore complex protein NUP107 28 179 - -
Vivi743g00004 722 Gene3D Ribonuclease Inhibitor 190 329 IPR032675 -
Vivi743g00004 722 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi743g00004 59 709 Receptor kinase-like Gene Family AT3G47570 44.127 1.28e-180 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi743g00004 Pkinase 3.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi743g00004 - - vvo:131635889 1405.96