Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi743g00002 ATGAAGTCTTTTATTTTCTTGTCACCTATACTTTTATACCTTCATCTTCTTTTTCTGTTCACCTTAACTTTAATATACTTTGGTTCAAACAAAATTATGGCAGTGACATTAGGAAACCAAACTGATCATTTAGCATTGCTCAAATTCAAAACATCAGTAACTAGTGATCCATATACAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGTATGGAATCACATGCAGCCCCATGCATCAAAGAGTGATTGAGTTGAACTTAGATGGGTATGAGTTACATGGATCTTTATCTCCCTATGTTGGCAATCTCACTTTTTTGAAAGCTCTCAACCTAGGAAACAACAGTTTCTTTGGAAAAATTCCACAGGAATTAGGTAAGTTGCTACAATTGCAACATCTTCGTCTCACCAATAACTCATTTGCAGGTGAAATTCCTACAAACTTGACATATTGTTCCAATCTCAAATACTTGAATTTGGGACACAACAATTTAACTGGCAAAATACCAATTGAAATTGGTTCTTTGAAAAAGCTTCACTTATTTGTTGTTTGGAAAAACAATTTAACAGGAGGAGTCTCTTCATCCATAGGCAATCTTTCAACCTTAATTTCTTTTTCGTGTGCTTTTAACAACTTAGAAGGAGAAATTTCACAGGAAATATGTCGCCTAAAAAGCCTAAAATTTTTAGGTTTCCCTGCCAATAATTTATCTGGTTTAATTCCTTCTTGTCTTTACAACATTTCAACACTTACTACACTTTCCTTGACAGATAATAGCTTTCATGGTTCTCTCCCACCTAACATGTTCCACACCCTCCCCGATCTCCAAATATTTGAAATCGCAGGAAATTATTTTTCAGGTCCATTCGTCACTTCCATAATAAATGCAACTTCCATTATAACATTTGAAATAAGTACAAATTACCTTGTGGGACAAGTTCCAAGTTTAGGAAGACTAAAAGATTTACAAAATCTGAATTTGGAACAAAACAATTTAGGCAATTTATCCACCGAACTTGAACTACTATTTCTTGGGGGTAATATGATATCGGGACAAATTCCTGCTGACTTAGGTTGTCTAGTTGGCTTAATTCTCTTAACAATGGAACTTAATCATTTTGAAGGAAATATTCCAACTACTTTTGGGAGTTTTCAAAAGATGCAGCAGTTAAGTTTGAGCGGAAACAAGCTGTCAGGAGATATACCATCCTCTATAGGTAATCTTAGTCAATTGTATCTTTTGACTTTAAATCTTAATATGCTTGAAGGAAATATTCCTCTAAGCTTAGGAAATTGTCAAAAGTTACAACTTCTAGACCTTTCAGAAAACAAGCTTATAGGAACCATACCTTTAGAAGTTTTTAATCTTGTTTCTTTAACAAACTTATTAGACTTATCACATAACTCTTTCAATGGTAGCTTATCAAGAGAAGTGAGTATGCTAAAAAATATTGGTTCGATAAATTTCTCTTATAATCATTTGTCGGGGGAGATTCCGATATCTATTGGTGAATGCACAACCTTAGAATACCTTGATTTGCAAGGGAACTCCTTCAACGGAACAATACCATCCTCGTTGGCTTCTCTCAAAGGTCTTCAGTATTTAGACCTTTCATTGAATCAATTGTCCGGTTCAATTCCTGATGTTCTACAAAATATCTCAGGTTTAAAACACTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGGTACCAACAAAAGGTGTTTTTGGAAATTCAACCCAAATAGGAATGATTGGAAATAAAAAGATTTGTGGAGGCATTTCACAACTGCATCTACCAGCGTGCCCCATCAAGGATAAAAAACACAGAAAACACCAAAATTTCTTGTTGATTGCAGTGATAGTTGGTGTTCTTTGTTTTCTTCTCATACTGTCAATTTTTATAACTAGCTACTGGATGAGGAAAAGATACCAAAAACGATCTTTTGATTCATCGACTATTGATCAACTTGATAAGGTTTCATACCGAGACTTATATCGAGGAACCAATGGATTCTCAATTACAAATTTAATTGGATCAGGAAGTTTTGGGTCTGTGTACAAAGGAAATCTTGTGTCTGAAGACAATTTTGTTGCCATAAAGGTCCTGAATCTTCAGAAGAAGGGAGCTCACAAGAGTTTTATTCTTGAATGCAATGCACTCAAAAATATTAGACACCGAAATTTAGTCAAGATTATAACATGTTGTTCTAGTTCAGATTATAAAGGTCAAGAATTTAAAGCTCTTGTTTTTTATTACATGAAAAATGGAAGTTTGGAACAATGGCTGCATCCTGAGATTTTAAATGCAGAGAATCAAACAACATTGGACCTCACTCATAGAGTAAACATCATTACCGATGTTGCTTCAGCAGTACATTATCTTCATCAAGAATGTGAACAATTGATCATTCATTGTGATCTCAAGCCAAGTAATGTACTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCGGTCATTGATGATACCTCTCATAAGGATACCAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCGGAGTATGGAACGGGGTCTGAAGTGTCTGCATGTGGTGACATGTATAGCTTTGGAATCTTGATGTTGGAAATTCTTACTGGTCGAAGACCCACAAATGAAGTTTTTGAAAATGGCCAAAATCTACATAACTATGTCGCAACTTCATTTCCCAATAAAGTTATAAAGATTTTGGACCCGTGTCTTGTATCAAGATTTGCAACAGTAGAAATACAAGATGGAAATTGTGAGATTCTTATTCCAAATGTTGAGGAGTGCTTGATTTCACTTTTTAGGATTGGACTTTTGTGTTCAATGGAATCACCAAAAGAAAGAATGAATATTGTGGAAGTTACAAGAGAGCTTAACATAATCAAAAAAGACTTCTCTCGTTGGTGA 2955 0.3492 MKSFIFLSPILLYLHLLFLFTLTLIYFGSNKIMAVTLGNQTDHLALLKFKTSVTSDPYTTLESWNSSIHFCKWYGITCSPMHQRVIELNLDGYELHGSLSPYVGNLTFLKALNLGNNSFFGKIPQELGKLLQLQHLRLTNNSFAGEIPTNLTYCSNLKYLNLGHNNLTGKIPIEIGSLKKLHLFVVWKNNLTGGVSSSIGNLSTLISFSCAFNNLEGEISQEICRLKSLKFLGFPANNLSGLIPSCLYNISTLTTLSLTDNSFHGSLPPNMFHTLPDLQIFEIAGNYFSGPFVTSIINATSIITFEISTNYLVGQVPSLGRLKDLQNLNLEQNNLGNLSTELELLFLGGNMISGQIPADLGCLVGLILLTMELNHFEGNIPTTFGSFQKMQQLSLSGNKLSGDIPSSIGNLSQLYLLTLNLNMLEGNIPLSLGNCQKLQLLDLSENKLIGTIPLEVFNLVSLTNLLDLSHNSFNGSLSREVSMLKNIGSINFSYNHLSGEIPISIGECTTLEYLDLQGNSFNGTIPSSLASLKGLQYLDLSLNQLSGSIPDVLQNISGLKHLNVSFNMLEGEVPTKGVFGNSTQIGMIGNKKICGGISQLHLPACPIKDKKHRKHQNFLLIAVIVGVLCFLLILSIFITSYWMRKRYQKRSFDSSTIDQLDKVSYRDLYRGTNGFSITNLIGSGSFGSVYKGNLVSEDNFVAIKVLNLQKKGAHKSFILECNALKNIRHRNLVKIITCCSSSDYKGQEFKALVFYYMKNGSLEQWLHPEILNAENQTTLDLTHRVNIITDVASAVHYLHQECEQLIIHCDLKPSNVLLDDDMVAHVSDFGIARLVSVIDDTSHKDTSTIGIKGTVGYAPPEYGTGSEVSACGDMYSFGILMLEILTGRRPTNEVFENGQNLHNYVATSFPNKVIKILDPCLVSRFATVEIQDGNCEILIPNVEECLISLFRIGLLCSMESPKERMNIVEVTRELNIIKKDFSRW 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi743g00002 984 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Vivi743g00002 984 Pfam Protein kinase domain 677 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00002 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Vivi743g00002 984 SMART serkin_6 675 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi743g00002 984 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 757 984 - -
Vivi743g00002 984 FunFam LRR receptor-like serine/threonine-protein kinase EFR 646 756 - -
Vivi743g00002 984 Gene3D Ribonuclease Inhibitor 37 229 IPR032675 -
Vivi743g00002 984 Pfam Leucine rich repeat 510 569 IPR001611 GO:0005515
Vivi743g00002 984 ProSiteProfiles Leucine-rich repeat profile. 156 179 IPR001611 GO:0005515
Vivi743g00002 984 Gene3D Transferase(Phosphotransferase) domain 1 757 983 - -
Vivi743g00002 984 SUPERFAMILY Protein kinase-like (PK-like) 650 976 IPR011009 -
Vivi743g00002 984 FunFam LRR receptor-like serine/threonine-protein kinase EFR 333 611 - -
Vivi743g00002 984 ProSiteProfiles Leucine-rich repeat profile. 324 345 IPR001611 GO:0005515
Vivi743g00002 984 PANTHER OS04G0122200 PROTEIN 109 224 - -
Vivi743g00002 984 ProSitePatterns Protein kinases ATP-binding region signature. 681 704 IPR017441 GO:0005524
Vivi743g00002 984 Pfam Leucine Rich Repeat 156 176 IPR001611 GO:0005515
Vivi743g00002 984 Pfam Leucine Rich Repeat 109 130 IPR001611 GO:0005515
Vivi743g00002 984 FunFam Leucine-rich repeat receptor protein kinase EMS1 150 245 - -
Vivi743g00002 984 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 41 149 - -
Vivi743g00002 984 Gene3D Phosphorylase Kinase; domain 1 655 756 - -
Vivi743g00002 984 SUPERFAMILY L domain-like 340 595 - -
Vivi743g00002 984 Gene3D Ribonuclease Inhibitor 230 606 IPR032675 -
Vivi743g00002 984 SUPERFAMILY L domain-like 40 335 - -
Vivi743g00002 984 ProSiteProfiles Protein kinase domain profile. 675 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi743g00002 39 981 Receptor kinase-like Gene Family AT3G47570 42.641 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi743g00002 Pkinase 2.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi743g00002 - - gmx:100801459 1160.98