Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi742g00018 ATGATAAATGGAGCAATAGCAGAATTACGTCATGTATTTTGCTTCACATGCATTGTTAATGAATTCGAAGAAGAAAAAGTTTTACTAAAAGAAGAAATAAAAACATTGGAGCAACGCGCTAAAGTGGCAGCAGGAAGAGATAAAGATATTCTTGCTAATGTTCATTATTGGAAAGAGAAAGTTGATAAGCTCATCCAAGAGGACATCAAAACAAAACAAACATGTTTTTTGGGCTTATGCGCTGATTGCATGTGGCGATATAAAAGAGGAAAGGAGTTGGCAAATAACATGGAGGAGATTAAACATTTGATAAATAAGGGAGAAAAATTTGAAAATATTGAACGTTTTCAATCTAAAGATTACATTTCTTTTAAAAGTAGAGAGTCTAAATATAGAGAGCTTATGGATGCACTACTAGATGACAAAAACTATACGATTGGATTGCAAGGTATAGGGGGCATCGGAAAAACTACATTGGCCAAAACATTGGGTAAAGAATTAAAGATATCTGAACAATTCACTCATGTAATCATTACAACAATGTCATTTACACCTGATACAAAAAAAATTCAAGATGATATTGTTGGTCCTTTTGGACTGGAATTGGGGAACTATAATGACTCATACAGGCCCGAAAAAGTATGGCGGATATTAACAAGTGGTGAGAAAATTCTTCTTATAATGGATGATGTGTGGGATCAAGACCCGCCTCTTGATTTTGATCTAATAGGGATTCCAAAAAAAGACAGTCACAATGGATGCAGAGTTCTTATAACCACACGGAGTAAACAAGTATTACAAAAAATGAATTGTGATAAGAAGATTGAATTGGAGCTATTATCGGAAGAAGAAGCATGGGATATGTTCAAAACGTACGCCGGTATAAACAATAGTTTTTCAAAAAAATTGATTACTAAGGGACGTGAAATTGCTAAGGAATGCAAACAATTACCGATTGCAATTGTAGTTATCGCTGGAAGTTTAAATGGCCAACAAGATCGTAAGCACCAGTGGGATGCTACGCTAAAATCATTGAAGAAAACTGTATCCATGGATGATGTCGATAAAGATAAGGTTGAAATTTATAAATGTTTGAAGTCTAGCTATGATGGTATGAAGGATGAAAAAGTCAAGGGATTGTTTCTCCTATCTTCTCTATTCCCAGAAGATAAAGAAATTTCTATTGAAATTCTAACTAGACTAGGCATAGGAACAGGCCTTTTTGGGAAGAATTACGGTAGGTACAATGATGCTCGAAACGAAGTAGGTGTAGCTATATATAAACTCATAGATTTGTGTTTGATGGTGGGGGTCGGTGAAGAACATGTAAAAATGCATGATTTGGTTCGTGAAGCGGCTCAATGGACAGCATACAAAGAGATTCGATGTGTGAAATTATCGAACAAAGATGAAAAATCATCAGTTGAAAAGGAAAAAAATATGAAATATTTATTTTGTGAAGGGAAGTACATGGATTTGTTTTCTTGGAAGTATGATGGTTCCAAACTTGAGACTCTAATTCTTGACGTGAAAAGGGATGAAGACCGTAAACGTATGGAAGCCCGAAGTTATTTCTTTGAAAATATTGACCATCTTCAAGTTCTGTACTTTTCAAGTCATACAAATAAACCCCAATCATTACCAGATTCATTTTGTAACAGCCCGAATTTTATTATTTGGCTAATTAAATTAAATAAGGATTTATTTACTTAA 1713 0.3421 MINGAIAELRHVFCFTCIVNEFEEEKVLLKEEIKTLEQRAKVAAGRDKDILANVHYWKEKVDKLIQEDIKTKQTCFLGLCADCMWRYKRGKELANNMEEIKHLINKGEKFENIERFQSKDYISFKSRESKYRELMDALLDDKNYTIGLQGIGGIGKTTLAKTLGKELKISEQFTHVIITTMSFTPDTKKIQDDIVGPFGLELGNYNDSYRPEKVWRILTSGEKILLIMDDVWDQDPPLDFDLIGIPKKDSHNGCRVLITTRSKQVLQKMNCDKKIELELLSEEEAWDMFKTYAGINNSFSKKLITKGREIAKECKQLPIAIVVIAGSLNGQQDRKHQWDATLKSLKKTVSMDDVDKDKVEIYKCLKSSYDGMKDEKVKGLFLLSSLFPEDKEISIEILTRLGIGTGLFGKNYGRYNDARNEVGVAIYKLIDLCLMVGVGEEHVKMHDLVREAAQWTAYKEIRCVKLSNKDEKSSVEKEKNMKYLFCEGKYMDLFSWKYDGSKLETLILDVKRDEDRKRMEARSYFFENIDHLQVLYFSSHTNKPQSLPDSFCNSPNFIIWLIKLNKDLFT 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi742g00018 570 Gene3D - 101 276 IPR027417 -
Vivi742g00018 570 Gene3D - 279 373 IPR042197 -
Vivi742g00018 570 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 557 - -
Vivi742g00018 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 382 IPR027417 -
Vivi742g00018 570 PRINTS Disease resistance protein signature 145 160 - -
Vivi742g00018 570 PRINTS Disease resistance protein signature 218 232 - -
Vivi742g00018 570 PRINTS Disease resistance protein signature 314 328 - -
Vivi742g00018 570 Coils Coil 19 46 - -
Vivi742g00018 570 Pfam NB-ARC domain 128 370 IPR002182 GO:0043531
Vivi742g00018 570 FunFam Probable disease resistance protein At1g61300 107 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi742g00018 146 485 WRKY Transcription Factor Family AT5G45050 24.138 1.34e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi742g00018 - - vvo:131635880 1138.25