Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi742g00017 ATGGAAAGTTCCTTAACTGATTTGGGGAAGTCATTTGTGGAGAAAATGATAAATGGAGCAATAGCAGAATTACGCCATGTATTTTGCTTCACATGCATTGTTAAGGAATTCGAAGAAGAAAAAATTTCACTAAAAGAAGAAATGAAAACATTGGAGCAACGTGCTAAAGTGGCAGCAGGAAGAGATAAAGATATTCTTGCTAATGTTCATTATTGGAAAGAGGAAGTTGATAAGCTCATTCAAGAGGACATCAAAATAAAACAAACATGTTTTTTGGGCTTATGTCCTGATTGCATGTGGCGATATAAAAGAGGGAAGGAGTTGGCAAATAACATAGAGGAGATTAAACATTTGATAAAAAAGGGAGAAAAATTTGAAAATATTGAACGTTTTCAATCTAAAGATTACATTTCTTTTAAAAGTAGAGAGTGCAAATATAGAGAGCTTATGGATGCACTACTAGATGAAAACAACTATATGATTGGATTGCAAGGTATAGGGGGCATCGGAAAAACTACATTGGCCAAAAAAGTGGGTAAAGAATTAAAGATATCTAAACAATTCACTCGTGTAATCATTACAACAGTGTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGTTGGTCCTTTTGGACTAGAATTGGAGAACTATAACGACTCAAACAGGCCCGAAGAAGTATGGAGGATATTAACAAGTGGTGAGAAAATTCTTATTATAATGGATGATGTGTGGGATCAAGACCCGCCTCTTGATTTTGATCTAATAGGAATTCCAAAAAAAGACAGTCACTATGGTTGCAGAGTTCTTATAACCACACGGAGTAAACAAGTATTACAAAAAATGAATTGTGATAAGAAGATTGAATTGGAGTTATTATCGGAAGAAGAAGCATGGGATATGTTCAAAGCGTACGCCGGTATAAGCAATAGTTTTTCAAAAAAATTGATTACTAAGGGACGTGAAATTGCTAAGGAATGCAAACAATTACCGATTGCAATAGTAGTTATCGCCGGAAATTTAAAGGGCCAACAAGATCGTAAGCACCAGTGGGATGCTACGCTAAAATCATTGAAGAAAACTGTATCCATGGATGATGTCGATAAAGAAAAGGTTGAAATTTATAAATGTTTGAAGTCTAGCTATGATGGTATGAAGGATGAAAAAGTCAAGGGATTGTTTCTCCTATCTTCTCTATTTCCAGAAGATAAAGAAATTTCTATTGAAATTCTAACTAGACTAGGCATAGGAACAGGCCTTTTTGGGAAGAATTACGGTAGGTACAATGATGCTCGAAACAAAGTAGGTGTAGCTATATATAAACTCATAGATTTGTGTTTGATGGTGGGGGTCGGTGAAGAACATGTAAAAATGCATGATTTGGTTCGTGAAGCAGCTCAATGGACAGCATACAAAGAGATTCGATGTGTGAAATTATCGAGCAAAGATGAAAAATCATCGGTTGAAAAGGAAAAAAATATGAAATATTTATTTTGTGAAGGGAAGTACATGGATTTGTTTTCTTGGAAGTATGATGGTTCCAAACTTGAGACTCTAATTCTCGACGTGAAAAGGGATGAAGACCGTAAACGTATGGAAGCCCGGAGTTCTTTCTTTAAAAATATTGACCAACTTCAAGTTTTGTACTTTTCAAGTCATAACAAACGACCCCTATCATTACCAGATTCAATTCACTCATTGGCAAATATTCGATCTATACTGGTTGATGGAGTTGATTTAGGTGACATCTCTGTTTTGGGAAATCTACAAAGTCTTGAGACTCTTGATTTGGTTAATTGCGGAATCAATGAATTGCCACACGAAATTTCAAAGTTGGGGAAATTTAAAGTGTTAAACTTGAAAGACTGTGAAATTAGAAAGAATAATCCATTTGAGGTTATTAAAGTATGTCTGACACTTGAAGAGTTGTACTTCATAGATAGTTTTAATAGGTCTTGTGACGAAATAAACTTACCCCAATTGCAAAGGTATCGTGTAGGTAATAAGTGGGACTGGAGTCGGATTAGTTATTCACTATCAAAATGTGTGGCTTTTACTGACAAATTCAGTTTTCCTTCAAAAGCAACATACAAGTATTGCATGCAAACATCAGAGAGTCTTCAACTAAATGGAATTTCAATTATGGAGGGATGGATAAATCTCATGCCTGAGATTGTTGATATACATCATGGTATGAATGATCTTGTTGAGCTTTGTCTGACAGAATTTTCACAATTACAGTGTCTCACTGACACAATTGGTTTTCAAGTTCCACCAGTATTGTCCAACTTGTTTGTCTTAAAACTGGAAAAAATGAACAATTTGGAAATACTATTCAAAGGTTCCCTTTCTTTTGAATCTTTGAAGTGTTTGGAGGAGCTATCAATAACAAACTGTAAAATGCTTCAAAGATTGTCTGATTCTCTGCTAAACCTCTACAATCTAAAGACTATTGTACTTCGGAAATGTCCAATGTTGGTTAACCTCTCTTCATTGTTAACTTCTCGGAACCTGACGGTGTTAGAGAGATTGGAAATATTTGATTGTGGGAACTTGAAAAACATAATAATAGATGAAAGAGGAGAAAAGGAATTGAGAGAAACATATAACAAGAAATATGTCTCAATGTTTCCAAAACTAAAACATCTTGAAATTTTAAACTGTCAGCTATTAGAATCAGTACTTCCTTTGCTCTTCTCTCAAGACCTTCCAGTTCTAGAAGATTTAAGAATAGAAAACTGTGATGAGCTCAAATACATATTTAGAAAATGTCAACATGTTGAATTGGGTTTGTTAAAACATATACAGCTTTGGCAATTCCCAAAATTGAAAACACTTAGAGTTCAAAACTGCGAGCAATTGGAATATATATTTGAGCACTACATTGATGACCATCAAAACCACAATGGAATTCACCTTAATCTTCCAGCATTACAACATGACCATCAAAACCACAATGAAATTCACCTTGATCTTCCAGCATTACGATATCTGGAGCTTCGCTATCTAAAAAAATTAGTCTCCATATGTCCGAAACACTATTATACAACAATTCCTCAATTGAAAATACTTGATCTCGAAGAATGCTCTTTGGATAATTCAATCATGAAGCTCCTTTATACATGGCAACGGGCACAGTATCTTCCACTACAATCAAATATCATGTGCAATGTTACGAGTATTACGCTATATGGTATTTCTAAGATAAAATCTATGTTTCTGCTTTTTAATACTTCAAGAATGCTGGTGGAATATTTGGCAATTGTGAATTGTGATGAATTGAAGCACATAATAGTAGACATTGGAGATGATGATGATGATAATGTTAGCAATAATTTGGTCAATGTCTTTCCAAAACTACAATACTTTCGCGTTGTAAATTGCGGGGAATTGAAACACATATTTGGACACTACTCTGATGGCCATCAAAACAAGAATGAGATTCACCTTCAATTTCCAGCATTAGAGTATCTCCAACTTTACAATCTGCGAAGTTTTGTTGCCATGTGTCCAACACAATATCATACAACATTTCCACCTTCGATAGATTTCGAGGGTTCCTCTTTAGATGATGCATTCTTGAAGTGTTTGAAAGAAACAAATGACCAAAGTATTCAATACCTTAAAAATTGGCGCGCGAGTCATGTAGGTGATAACAATTATAATAGTTCATACAAAGATTTACATGAAGTGGAGCAGACTGCATGTAATGGAAAGAGACAAGTTCAAGTACAATCGAAGAAAGAGTCAACATCACATAAGATGGAAGAGGCACTTTTAGCATGGACTAAAGCATCTTTGGCAAAAGTTGAGAGATACAGGGATATGAGTCTGGAGAGTACTTCACGTGTAACATCAGAGTGCTCTCTTACTAAGTGTGTGACAGTTCTGGATGAGATGAGAGACATTCCGCAAGATGCATATGCAAAAGCTTTGGAAAAATTGATGAATCCTGATTGGAGAGAAGTTTTCATCGCCATGTCAATTGAGAGGAAACGTGGATGGGTACTTGGACTTAAAGGATAA 4032 0.3502 MESSLTDLGKSFVEKMINGAIAELRHVFCFTCIVKEFEEEKISLKEEMKTLEQRAKVAAGRDKDILANVHYWKEEVDKLIQEDIKIKQTCFLGLCPDCMWRYKRGKELANNIEEIKHLIKKGEKFENIERFQSKDYISFKSRECKYRELMDALLDENNYMIGLQGIGGIGKTTLAKKVGKELKISKQFTRVIITTVSFTPDTKKIQDDIVGPFGLELENYNDSNRPEEVWRILTSGEKILIIMDDVWDQDPPLDFDLIGIPKKDSHYGCRVLITTRSKQVLQKMNCDKKIELELLSEEEAWDMFKAYAGISNSFSKKLITKGREIAKECKQLPIAIVVIAGNLKGQQDRKHQWDATLKSLKKTVSMDDVDKEKVEIYKCLKSSYDGMKDEKVKGLFLLSSLFPEDKEISIEILTRLGIGTGLFGKNYGRYNDARNKVGVAIYKLIDLCLMVGVGEEHVKMHDLVREAAQWTAYKEIRCVKLSSKDEKSSVEKEKNMKYLFCEGKYMDLFSWKYDGSKLETLILDVKRDEDRKRMEARSSFFKNIDQLQVLYFSSHNKRPLSLPDSIHSLANIRSILVDGVDLGDISVLGNLQSLETLDLVNCGINELPHEISKLGKFKVLNLKDCEIRKNNPFEVIKVCLTLEELYFIDSFNRSCDEINLPQLQRYRVGNKWDWSRISYSLSKCVAFTDKFSFPSKATYKYCMQTSESLQLNGISIMEGWINLMPEIVDIHHGMNDLVELCLTEFSQLQCLTDTIGFQVPPVLSNLFVLKLEKMNNLEILFKGSLSFESLKCLEELSITNCKMLQRLSDSLLNLYNLKTIVLRKCPMLVNLSSLLTSRNLTVLERLEIFDCGNLKNIIIDERGEKELRETYNKKYVSMFPKLKHLEILNCQLLESVLPLLFSQDLPVLEDLRIENCDELKYIFRKCQHVELGLLKHIQLWQFPKLKTLRVQNCEQLEYIFEHYIDDHQNHNGIHLNLPALQHDHQNHNEIHLDLPALRYLELRYLKKLVSICPKHYYTTIPQLKILDLEECSLDNSIMKLLYTWQRAQYLPLQSNIMCNVTSITLYGISKIKSMFLLFNTSRMLVEYLAIVNCDELKHIIVDIGDDDDDNVSNNLVNVFPKLQYFRVVNCGELKHIFGHYSDGHQNKNEIHLQFPALEYLQLYNLRSFVAMCPTQYHTTFPPSIDFEGSSLDDAFLKCLKETNDQSIQYLKNWRASHVGDNNYNSSYKDLHEVEQTACNGKRQVQVQSKKESTSHKMEEALLAWTKASLAKVERYRDMSLESTSRVTSECSLTKCVTVLDEMRDIPQDAYAKALEKLMNPDWREVFIAMSIERKRGWVLGLKG 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi742g00017 1343 Gene3D - 123 291 IPR027417 -
Vivi742g00017 1343 PRINTS Disease resistance protein signature 233 247 - -
Vivi742g00017 1343 PRINTS Disease resistance protein signature 589 605 - -
Vivi742g00017 1343 PRINTS Disease resistance protein signature 160 175 - -
Vivi742g00017 1343 PRINTS Disease resistance protein signature 329 343 - -
Vivi742g00017 1343 Coils Coil 34 61 - -
Vivi742g00017 1343 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 923 1169 - -
Vivi742g00017 1343 SUPERFAMILY L domain-like 456 954 - -
Vivi742g00017 1343 SUPERFAMILY RNI-like 878 1136 - -
Vivi742g00017 1343 Pfam NB-ARC domain 146 385 IPR002182 GO:0043531
Vivi742g00017 1343 Gene3D Ribonuclease Inhibitor 459 673 IPR032675 -
Vivi742g00017 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 397 IPR027417 -
Vivi742g00017 1343 Gene3D - 294 388 IPR042197 -
Vivi742g00017 1343 Gene3D Ribonuclease Inhibitor 870 970 IPR032675 -
Vivi742g00017 1343 Gene3D Ribonuclease Inhibitor 680 869 IPR032675 -
Vivi742g00017 1343 Gene3D Ribonuclease Inhibitor 971 1179 IPR032675 -
Vivi742g00017 1343 FunFam Probable disease resistance protein At1g61300 121 289 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi742g00017 161 484 WRKY Transcription Factor Family AT5G45050 25.664 2.04e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi742g00017 - - vvo:131593401 1287.71