Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi741g00008 ATGGATTCTTCTAGTGAACAACATCAGCAAATGTCTAACCAGTCATTGGAGCGCATGTTAACATGTTCAAAAGGAGAGCAAGACAAAAAGGCAAAACCTCAACCAGAGGCACTAAAATGTCCGAGATGTGACTCGAGCAACACCAAGTTTTGTTACTACAACAATTATAGTCTTTCGCAACCGAGATATTTCTGCAAGTCGTGTAGGAGATATTGGACTAAAGGAGGTACGTTAAGAAATGTTCCTGTTGGTGGGGGGTGTAGAAAGAACAAAAGATCGTCGTCGTCGGCGTCGAGAAGAATTCAAGATCAAGCATTTGTAAACATTCCGGATGCTGTTAATTGTTTCCCTTCGTTGGGTTATGATTCCAATGATCTTACTCTTGCTTTAGCTAGGCTTCATAAGGGTCAACTTGGATTTGATCATGAACATGATTTTTCCATTTTAGGAAATCAGGCCAACTCAAACATAAACACAAACACCTCATGTGCTGTTCTTAACAATCATGGTATGAACCATTTATCAAACAATCATAGTTTCTTTGAAGCACTCATGGGGTCTCAGAACAATGTGTACTATGGATATGGGAATAGGGACATGGGGGAAGTGGATAATGGCAATGGCAATGTTAGTGGTGAGATGATGTTGCCTTATGATCATGAAATGAGCATTGCAACAACTCAAGCAGTGACAGTAACTACCATGAAACAAGAAATTTGTAATGTTAGGGAACAAAATGAAAATAGGGTTTTGTTAGGTTTTCCATGGCAGTTCAATAATGGAGATTCTAACATGGCTGAAATTGATCACTCAGGAAGAGCTGGTTGGAATGGACTCACTTCACCTTGGCATGGCCTTTTTAATAGCCCCCTAATGTAG 879 0.3993 MDSSSEQHQQMSNQSLERMLTCSKGEQDKKAKPQPEALKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSASRRIQDQAFVNIPDAVNCFPSLGYDSNDLTLALARLHKGQLGFDHEHDFSILGNQANSNINTNTSCAVLNNHGMNHLSNNHSFFEALMGSQNNVYYGYGNRDMGEVDNGNGNVSGEMMLPYDHEMSIATTQAVTVTTMKQEICNVREQNENRVLLGFPWQFNNGDSNMAEIDHSGRAGWNGLTSPWHGLFNSPLM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi741g00008 292 MobiDBLite consensus disorder prediction 1 21 - -
Vivi741g00008 292 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Vivi741g00008 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 202 IPR045174 GO:0003700|GO:0006355
Vivi741g00008 292 MobiDBLite consensus disorder prediction 1 38 - -
Vivi741g00008 292 MobiDBLite consensus disorder prediction 22 37 - -
Vivi741g00008 292 Pfam Dof domain, zinc finger 37 92 IPR003851 GO:0003677|GO:0006355
Vivi741g00008 292 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi741g00008 6 292 C2C2-Dof Transcription Factor Family AT2G28510 37.910 3.41e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi741g00008 zf-Dof 9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi741g00008 - - gmx:100799737 379.022