Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi741g00001 ATGGAAAGTAAAAGTACTACTAGTGACACATGCTCTGTTCCACTTTCTCATAACTCTTCAACTTCATCTAACTCTAACTCTCCTCCACAAGCTGTTGTTGTTTTGAGCCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTTCTGCTGATAAATGTGTTTTGGCTCCTTATTTTCCTCCTACTGATCCTGCCAAGTTTACCATTGCTCATAGAGTCTTTGGTGCTAGCAATATCATCAAATTCTTACAGGAACTGCCTGAGGCTCGAAGAGCGGATGCAGTAACGAGCATGGTTTATGAGGCGAGTGCGAGAATTAGAGATCCTGTTTATGGTTGTGCCGGAGCAATTTGTCAGCTACAAAAGCAGGTGAATGAGCTTCAAGCACAATTGGCGAAATCGCAAGCGGAGGTTGTAAACATGCAACTCCAACAAGCGAATCTTGTGGCTTTATTTTGCATGTCACAAAGTGAACAAGAGTCACCACAGCAATCTATGGATGAGTTCATTCAAAGTCCTATGCAGAGTGGTGGCTATGGAATTGGTTTGAACTTTCTTGAGGAGAATAATAGTCTAAATTCATTGTGGGAGCCACTTTGGACATGA 606 0.4241 MESKSTTSDTCSVPLSHNSSTSSNSNSPPQAVVVLSPCAACKILRRRCSADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPEARRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKSQAEVVNMQLQQANLVALFCMSQSEQESPQQSMDEFIQSPMQSGGYGIGLNFLEENNSLNSLWEPLWT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi741g00001 201 MobiDBLite consensus disorder prediction 1 30 - -
Vivi741g00001 201 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Vivi741g00001 201 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Vivi741g00001 201 Coils Coil 117 144 - -
Vivi741g00001 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi741g00001 33 201 AS2 family AT2G28500 67.204 1.12e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi741g00001 LOB 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi741g00001 - - gmx:100789504 282.337