Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi740g00015 ATGACAAAACCTGCTTATGTTGTTGTTTATGTCTTTCTTGTTTGCGCTATGACCAAAGGGGGTTCAGAGGGAAAGAGATGGAAACATGATGATTTTCATGCCGATCATGTTGGAGAAAAGGCAGAGCAGGTGTGGAGACATTGTAGAAAAGAAACGATAGAGAGGAGTTATGGTATCAAAGAATTTGAATTGCGTTTATTAGATGAGACGAGGAGAAAGAGATCGAAATATCTACCTCCCTATATGAAACAACACTTTTTGGATTGCTTAAGAAACAGAAACTATCCTATTCCTGTTTCGGAAGAGGAGGGGCATTTGTTGAAGAAGCATTATGAATCACTCTTTGGTTTAGCAGATCGACGTAGATATTTACTTTCAGAGTTACCGCATAATCAGACACCACCAAGCCCTGATTCTGTTCCATCATCCGGATCATCACCAAAACTGAAAAGTCATGTTGCAGAACAAACTACTTCTTCACCTCCAACTCCTGAGTTTCCGTATCATGATTTTACACTCCCTCCAAACGTGTTTGTGCCATTTTTATCATCACCTCCACCACCACCACTTCCACCTCGTTCTCTTCCTCCTCCTCCTTCTCCTCTTGCCAATTTTGATCAGAAGGAAATTATTATTGCTGCAGTTGCATCAGGAATTATATTCTTAATAGGCTTGTTCTTTTGCATCCGCGAGGTGAGGAAGAGGAAAAAAGTTGACAAAGATGTCAGGCCTTTACTCGTATTAAGCTCAAGTGAGATGTCTGGTGGTAGTTCACAACAGTCTATAAGTTTCGAAAGTAATGATATGAAAGAATATGGTATTAACTACGGAATGAATCCTTCTACTGTTACGAATTTGTCCATTAAGCAAGAAGGCAACAATGCCTCACTGGCTGAGATAACATCATCAGATGACAAAGGACAAGTACCAGTATCTCCATTAAAGCATCTTCCAGGAAGATCAGACCCTGAGGCTTCACCGCCGCCGCCTCCACTACCCGCTCTTGCACCTCGCCCTCCACCTCCTCCAAAAACGGCTCGGGCTCCACCTGCTCCTCCCAAACCATTGGACGGTCGAAACCTTAAATCACCTCTAGGACCACTTCGTACTAAGGATGATGAAGAGTCTGATACTCCAAAACCGAAATTAAAGCCATTTTTCTGGGATAAGGTTGTAGCAAATCCTGATCAAGCCATGGTCTGGCATGAGATCAGATCAGGGTCATTCCAGTTCAGTGAAGAAAAGATAGAGTCTTTATTTGGCTGTGCCAACCAGAACAGAAATGAAAGAAAAAAAAATTCGCCATCTTTAGAACCTTCTGTCCAGTACATTCAGATTATTGAACCCAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGAGCACAAAAGAAGTTATTGGCGCCCTTAAAGAAGGTAATGAGATTCCTGTTGAGCTCATCCAAACATTATTGAAGATGGCTCCAACAACAGATGAGGAATTGAAGCTAAGGTTATTCACGGGTGATGTTTCTCGACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCACTGGCTTTCAAACGTCTTGAGTCACTACTGTTCATGTTTACACTTCCGGAAGAGGCTTCAAGCATTAAGGAATGCTTTAAAATATTAGAGGTTTCTTGCAACAAACTAAGGAAAAGCAGGCTCTTCCAAAAGCTATTAGAAGCAGTTCTAAAGACTGGAAACCGATTGAACAATGGAACTTATCGTGGTGGTGCTCAAGCATTTAGGCTTGACACACTTTTGAAACTTGCAGATGTAAAAGGAACAGACGGTAAGACCACACTGTTACACTTTGTGGTTCATGAGATTATTCGTACAGAGGGCATAAGAGCTGTAAGAACAGAAAAAGCAAGCCAAAGCCATTCTAGTATGAAAACCGATGATTTCGCCGATGAATCAAATAGGGAATCAGAAGAGCACTATCGCGACCTTGGCCTTCGAGTTGTTTCAGGTCTAATCACTGAACTAGAAGATGTGAAAAAGGCCGCAGTGATAGATGGTGATGCTCTAACATCTGCAGTGTTGAAACTTTATAATACATTGGTAAAATCTGAAGAACTATTGTATACGGATCTGAAGAATCTAGAAGAAGATAGCGAGTTTCAACATTCCCTTGCAAATTTTGTGGAGAAGGCAAGAGAGGACGTGGTATGGTTGATAGGGGAAGAGAAGAAGATAACGACCGGGGTTAAGAGTACTGCAGATTATTTTCATGGGAATGCAGGAAAAGATGAAGGGTTGCGCTTGTTTGTGATTGTACGTGATTTCTTGGTAATGTTGGACAAGGTGTGCAAAGAGGTACAAGCATCGACAACGAAGACATTAGCTCCCAAAGGTTCTCCTTCTAGCAAGAAAGAGACTCCTTCATCCTCTCCAGATAAACGTCAACAATCACTCTCTGATATGCATAGGAGACTATTTCCAGCCATAGCAGAGAGGAGAATACATGACTCTAGTTCCTCATCATCATCATCATCCTCCTCCGATGATGATGATGATAAGATGTTACCAACGTAG 2568 0.4171 MTKPAYVVVYVFLVCAMTKGGSEGKRWKHDDFHADHVGEKAEQVWRHCRKETIERSYGIKEFELRLLDETRRKRSKYLPPYMKQHFLDCLRNRNYPIPVSEEEGHLLKKHYESLFGLADRRRYLLSELPHNQTPPSPDSVPSSGSSPKLKSHVAEQTTSSPPTPEFPYHDFTLPPNVFVPFLSSPPPPPLPPRSLPPPPSPLANFDQKEIIIAAVASGIIFLIGLFFCIREVRKRKKVDKDVRPLLVLSSSEMSGGSSQQSISFESNDMKEYGINYGMNPSTVTNLSIKQEGNNASLAEITSSDDKGQVPVSPLKHLPGRSDPEASPPPPPLPALAPRPPPPPKTARAPPAPPKPLDGRNLKSPLGPLRTKDDEESDTPKPKLKPFFWDKVVANPDQAMVWHEIRSGSFQFSEEKIESLFGCANQNRNERKKNSPSLEPSVQYIQIIEPKKAQNLSILLRALNVSTKEVIGALKEGNEIPVELIQTLLKMAPTTDEELKLRLFTGDVSRLGPAERFLKALVDIPLAFKRLESLLFMFTLPEEASSIKECFKILEVSCNKLRKSRLFQKLLEAVLKTGNRLNNGTYRGGAQAFRLDTLLKLADVKGTDGKTTLLHFVVHEIIRTEGIRAVRTEKASQSHSSMKTDDFADESNRESEEHYRDLGLRVVSGLITELEDVKKAAVIDGDALTSAVLKLYNTLVKSEELLYTDLKNLEEDSEFQHSLANFVEKAREDVVWLIGEEKKITTGVKSTADYFHGNAGKDEGLRLFVIVRDFLVMLDKVCKEVQASTTKTLAPKGSPSSKKETPSSSPDKRQQSLSDMHRRLFPAIAERRIHDSSSSSSSSSSSDDDDDKMLPT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi740g00015 855 ProSiteProfiles Formin homology-2 (FH2) domain profile. 373 803 IPR015425 -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 631 652 - -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 128 166 - -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 322 357 - -
Vivi740g00015 855 SUPERFAMILY Formin homology 2 domain (FH2 domain) 386 787 - -
Vivi740g00015 855 SMART it6_source 373 792 IPR015425 -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 129 165 - -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 788 855 - -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 788 813 - -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 366 383 - -
Vivi740g00015 855 Pfam Formin Homology 2 Domain 375 777 IPR015425 -
Vivi740g00015 855 Gene3D Formin, FH2 domain 379 816 IPR042201 -
Vivi740g00015 855 MobiDBLite consensus disorder prediction 299 383 - -
Vivi740g00015 855 PANTHER FORMIN-RELATED 210 838 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi740g00015 855 MobiDBLite consensus disorder prediction 814 829 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi740g00015 309 832 FH2 protein (formin) Gene Family AT5G54650 54.332 3.17e-175 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi740g00015 - - qsa:O6P43_000616 783.867