Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi740g00013 ATGGACCCAAATTCACACTCCATCTTTTCCGGCAACACCCCCTCCTCCGCCATAGACCCAATGTTCTCCACCTTCAGCCTCCAATCTCTTCTCACTTTCAACCATTCCTTCTTCACTGACAACTTCCACGCCATAACCGACGACCCTCATCAACTCCCTAACCTCCCACAATCCATCACCGACCAAACTCCTTACCTTAACAACAACAAAAATGTCCTCATAGTCCCAAAAACCGAACACCCTCTTAATCTTCCTCCATTACAAGAATATCTCCCACTTCAACAACAACCCTTCAACTTCCTCCCCCAATACTATCCACCTTTCGAAACTTTCCACCGTCTTCCTCAACTCCATTCCTCTGAACACTCTAACAAAAAACGCCTCCGTCACCCTTTCACGGAGGAAATAACTCCACCACCACCACAGAAACAACCTCACTTTGTCCGTGGGAAATCTCCTTCCTTGATTCCTCAGAGCAAGTTAGCAAGACAGAGAAGACAAACACTAAGCGACAAAACACGCTGCTTGCAGAAACTAATGCCATGGGATAAGAAAATGGACCAAGCTACCCTTTTCGAAGAAGCTTACAAATATGTTAAGTTTTTGCAGGCTCAGATCTCTGCTCTTCATTCAATGCCTTCTCAGTCAACCACCAACACCACCTACAGCGGCGGCGACGATGATGGTGTTTTTGCTGAGTTGAAGAAGCTGAACAGAAACCAGGCTTTGCAGGTTGTGGTGAACTCACCGGTTGCACAAACAAAGCTTTATTCACAAGGCTACTGTGTTTTCTCCATGGAACAAATCTGTCTGCTTAGAAAAATATCAGAGAGAAGACAACAGCAGCAGCAGCTGAATATGTCGGACAATGCTTCTTCTTCCAAGACTTTCTTTCTCTAA 900 0.4544 MDPNSHSIFSGNTPSSAIDPMFSTFSLQSLLTFNHSFFTDNFHAITDDPHQLPNLPQSITDQTPYLNNNKNVLIVPKTEHPLNLPPLQEYLPLQQQPFNFLPQYYPPFETFHRLPQLHSSEHSNKKRLRHPFTEEITPPPPQKQPHFVRGKSPSLIPQSKLARQRRQTLSDKTRCLQKLMPWDKKMDQATLFEEAYKYVKFLQAQISALHSMPSQSTTNTTYSGGDDDGVFAELKKLNRNQALQVVVNSPVAQTKLYSQGYCVFSMEQICLLRKISERRQQQQQLNMSDNASSSKTFFL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi740g00013 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Vivi740g00013 299 Gene3D - 157 221 IPR036638 GO:0046983
Vivi740g00013 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 215 IPR036638 GO:0046983
Vivi740g00013 299 MobiDBLite consensus disorder prediction 132 153 - -
Vivi740g00013 299 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 150 274 IPR045843 GO:0003700|GO:0006355
Vivi740g00013 299 SMART finulus 159 208 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi740g00013 165 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 48.214 4.92e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi740g00013 - - vvo:131635828 456.832