Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi740g00011 ATGGACCCAATGTTTCCCGGCGACACCTCCTCCTCCGCCATAGACCCAATGTTCTCCGCCTTCAGCCTCCAATCTCTTCTCACTTTCAACCCTTCCTTCTTCACTGACAACTTCCACACCATAACCGACGAACCTCAACTTCCCAACCTCCCTCAATCTGCCACCGACCAAACTCCTTACCTTAACAACAAGAACAATTTCCTCATTGTTCCAAAAACCGAACACCCTCTTAATCTTCCTCAACTAGAAGAACATCTCCCATTTCAACAACAACCCTTCAACTTCCTCCCCCAATACTACCCACCACCCTTTGATACTTTCCACCGTCTCCCTCAGCTTCATTCCCTTGAACACTCTAACAGAAAACGCCTCCGCCACCCAGAAACAACTCCTCCACCACCACCACCACAGAAACAACCTCACTTTGTCCGTGGAAAATCTCCTTCCTTGATTCCTCAGAGCAAGTTAGCAAGACAGAGAAGACAAACGCTAAGCGACAAAACACGTTGTTTGCAGAAACTAATGCCATGGGATAAGAAAATGGATCAAGCTACCCTTTTTGAAGAGGCTTACAAATATGTCAAGTTTTTGCAGGCACAGTCATCTGTTCTTCAGTCAATGCCTTCTCATTCAACCACAACCTACAGCGGAGGCGGCGGCGACGGTGTTTTTGGTGAATTGAAGAAGCTGAACCGAAGCCAGGCGTTGCAAGTTGTGGTGAACTCACCGGTAGCACAAACAAAGCTTTGTTCACAGGGCTACTGTGTTTTCTCCATGGAACAAATCTCTGTGCTCAGAAAATCATCAGAGAGAAGACAACAACAGCAGCAGCAGAATATCTCTGATAATGATTCTTCTTCCAAGACTTTCTTTCACTAA 879 0.463 MDPMFPGDTSSSAIDPMFSAFSLQSLLTFNPSFFTDNFHTITDEPQLPNLPQSATDQTPYLNNKNNFLIVPKTEHPLNLPQLEEHLPFQQQPFNFLPQYYPPPFDTFHRLPQLHSLEHSNRKRLRHPETTPPPPPPQKQPHFVRGKSPSLIPQSKLARQRRQTLSDKTRCLQKLMPWDKKMDQATLFEEAYKYVKFLQAQSSVLQSMPSHSTTTYSGGGGDGVFGELKKLNRSQALQVVVNSPVAQTKLCSQGYCVFSMEQISVLRKSSERRQQQQQQNISDNDSSSKTFFH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi740g00011 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 206 IPR036638 GO:0046983
Vivi740g00011 292 SMART finulus 154 203 IPR011598 GO:0046983
Vivi740g00011 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Vivi740g00011 292 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 140 264 IPR045843 GO:0003700|GO:0006355
Vivi740g00011 292 MobiDBLite consensus disorder prediction 120 164 - -
Vivi740g00011 292 MobiDBLite consensus disorder prediction 267 292 - -
Vivi740g00011 292 Gene3D - 152 215 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi740g00011 160 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 47.273 7.50e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi740g00011 - - vvo:131635828 530.791