Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi740g00009 ATGCACGTCCACATGAAAGCTGAGTTAAAAGCAACATCCATTTCCTTTCAAAACCCTTCACTCTTCACCACAATCACTTCCCCTCCACCACTTCCTCAACCAGAAGCACTTAAAGGCTGCCTTGGAAGCCTAGATGGAGCATGCATCGAAAAGCTCTTACTCCATTGTGCAAGTGCTTTGGAAAGCAACGACATAACCCTAGCTCAACAAGTCATGTGGGTCCTAAACAACGTTGCTTCACCATTAGGTGACACTAACCAAAGACTAACCTCATGGTTTCTAAGAGCTTTAATCTCTAGAGCTTCAAGAATTTGTCCTACTTCAATGAACTTCAAAGGAAGTAACATTATTCAAAGACGGTTGATGTCGGTCACCGAACTCGCCGGGTATGTTGATCTTATTCCTTGGCATAGGTTTGGATTTTGTGCTTCAAACAATGAAATTTTCAAAGCTATTAAGGGATTCCAAAGGGTGCATGTTTTAGACTTTAGCATAACTCCTTGTATGCAATGGCCTACTTTTATAGATTCTTTGGCTAAGTTACAAGAAGGTCCTCCTTCACTTAGAATCACAGTTCCATCTTTTAGGCCAATGGTTCCACCTTTGGTTAATATGTCAATACATGAAGTTGGTCAACGTTTAGGTAATTTTGCAAAGTTTAAGGATGTCCCTTTTGAGTTTAATGTTATTGGAGATAATGTTCCGAATTCGATGGCATCGGAAGAATCGAGGAATATTGAATCAACTAGCTTTTATTTTGAATCAATGTTGAGTCTCTTGAATCCTAGTATGTTGAATCTTAGGGAAGATGAAGCCTTGGTTATAAATTGTCAAAATTGGCTACGATATTTGTCCGACGATCGAAAAGGTCAAAATATTTCGATTCGTGACGTTTTTATGAATTTAGTTAAAGGACTTAACCCTCAAATTATGCTATTGGTTGATGAGGATTGTGATCTTAGTTCATCAAGTTTAACATCAAGAATAACTGCTTCTTTTAACCATTTATGGATACCCTTTGATGCTTTGGACACTTTTTTGCCTAAAGATAGTTGTCAAAGGACAGAATTTGAATCTGACATAGGACAGAAAATTGAGAACATTATAAGCTTTGAAGGGCGTCAAAGGATTGAGAGATTGGAGTCAGGGATGCAAATGTCACAAAGAATGAAAAATGTTGGTTACTTTAGTGTTCCATTTTGTGATGAAACTGTTGTTGAAGTTAAGGGTTTGCTTGATGAACATGCTAGTGGATGGGGAATGAAAAGAGAAGAAAACATGTTGGTTCTTACATGGAAAGGAAATAGTTGCGTGTTTGCGACCGCTTGGATCCCTAATGAAATTAGGGATCATATCGGTATTTGA 1365 0.3802 MHVHMKAELKATSISFQNPSLFTTITSPPPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNIIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFQRVHVLDFSITPCMQWPTFIDSLAKLQEGPPSLRITVPSFRPMVPPLVNMSIHEVGQRLGNFAKFKDVPFEFNVIGDNVPNSMASEESRNIESTSFYFESMLSLLNPSMLNLREDEALVINCQNWLRYLSDDRKGQNISIRDVFMNLVKGLNPQIMLLVDEDCDLSSSSLTSRITASFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGRQRIERLESGMQMSQRMKNVGYFSVPFCDETVVEVKGLLDEHASGWGMKREENMLVLTWKGNSCVFATAWIPNEIRDHIGI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi740g00009 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 433 IPR005202 -
Vivi740g00009 454 Pfam GRAS domain family 50 443 IPR005202 -
Vivi740g00009 454 ProSiteProfiles GRAS family profile. 40 444 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi740g00009 23 445 GRAS Transcription Factor Family AT3G49950 43.387 3.46e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi740g00009 GRAS 5.1e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi740g00009 - - gmx:100805056 723.776