Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi73g00003 ATGGCACTACTACTACTACTTCCTCCTTCCATTCTACCCACAACCATCTTCACATTAGTCTTCCACTTCCTCCTCCTCACTCACGCCACAAAAAACCCAGATTTCCACCCATTACTCGCATTCAAAACAGCTACCGACACATCCAACAAACTCACCTCATGGAACATCACCAAAGACCTATGCACATGGTACGGTGTTTCTTGCCTCAGAAACCGTGTCTCCCGCCTCGTCCTCGAAAACCTCGACCTCAACGGTTCCATCCAACCTTTAACCTCTCTCACTCAGCTCCGTGTCCTTAGCCTTAAACGCAACCGTTTTAACGGTCCCATTCCAAATCTCTCCAACCTCACTTCATTAAGACTTCTCTTTCTCTCTTACAACAACTTCTCCGGCGAGTTCCCCTCCACCTTAACCTCGCTAACCCGCCTCTACCGTATTGATCTCTCTCACAACAAACTCTCCGGCGAGTTCCCGGTGAATGTCAACAATTTGTCTCGACTACTCACTCTCCGCCTAGACCAAAACCAAATCCATGGACATATTCCTAACATAGACCTCTCTTACATCCAAGACTTTAATGTATCAGGCAATAGTCTCTCCGGTCGAATACCGGAATATCTTGCGGGTTTTCCAGATTCTTCCTTCACACAAAACCCGTCTCTCTGCGGTACACCATTGCAAAAATGTAAAAACCTACCTGCACTCGCTTCTTCCTTGGTTCCATCTTCTGGTTCAATACCGGGAAACAAGACTCATAAATATGGAGGTCCAAGAATGGGGACTTTGGTCTTAATCGCCATTATCCTTGGCGATGTATTTGTACTCGCCATTGTTTCATTGCTTCTCTACTGCTACTTCTGGCGCAACCACTCTAACAAGATGAAGGAAAGAAAGGAAAGAGAATCAAATCCCAAGAGTTTAGAGGGCGAGAATCAAAAAATGGCTTATGTTGGGCAACAAGGGTTGGAGAAAGGTAATAAAATGGTGTTTTTCGAAGGAGCTAAGAGGTTTGAGCTAGAGGATTTGCTCCGTGCTTCTGCAGAAATGTTGGGGAAGGGTACACTCGGTACTGTCTATAAAGCAGTTCTTGATGATGGAAGTGTTGTTGCTGTGAAGAGGTTGAAGGAGGTTCATATTGGAGGGAAGAAAGAGTTCGAGCAGAGAATGGAAGTTATTGGAAGGTTAAGACACAACAACATTGTTAGCTTGAAGGCTTATTATTTTGCAAGGGATGAAAAATTGCTTGTTTTTGATTACATGGTTAATGGTAGCTTGTTCTGGCTCCTTCATGGTAACCGAGGACCCGGGCGAACCCCACTGGACTGGACCACAAGGCTAAAGATAGCAGCTGGAGCGGCACAAGGTGTGGCATTCATTCACAACCATAACAATAATACTAATCTAACCCACGGTAACATCAAATCCACCAACATCCTCGTTGACGTGTCTGGAACCGCACGCGTGGTTGATTTTGGGCTCTCCGTTTTCACCCTCCCATCAGCCAGAAGATCCAACGGTTACCGTGCTCCAGAAGCATCAGACGGTCGAAAACCGTCTCAGAAATCTGACGTGTACGCCTTCGGCGTTCTGTTAATGGAGATACTAACAGGAAAGTGTCCCTCCGCTGCGGACGGCGGAGCAGAGGTGGAGTTGCCAAAGTGGGTCCAGTCTGTGGTGAGGGAGGAATGGACGGCTGAGGTGTTTGATCTTGAGTTGATGAGGTATAAGGATGCTGAGGAGGAGATGGTGGCGTTGCTGCAGATTGCTTTGACGTGTACTGCGGTTGTACCTGATCAACGGCCCAAGATGAGCCACGTGGTCAAGAAGATTGAGGAGTTACGTGGAGTTGGTGACACGTTGGACTCTGTTTCTGAGTCACCTTCAGTGTCTGAAGATGCATGTGGTGGTGCTGCTCACTAA 1920 0.4714 MALLLLLPPSILPTTIFTLVFHFLLLTHATKNPDFHPLLAFKTATDTSNKLTSWNITKDLCTWYGVSCLRNRVSRLVLENLDLNGSIQPLTSLTQLRVLSLKRNRFNGPIPNLSNLTSLRLLFLSYNNFSGEFPSTLTSLTRLYRIDLSHNKLSGEFPVNVNNLSRLLTLRLDQNQIHGHIPNIDLSYIQDFNVSGNSLSGRIPEYLAGFPDSSFTQNPSLCGTPLQKCKNLPALASSLVPSSGSIPGNKTHKYGGPRMGTLVLIAIILGDVFVLAIVSLLLYCYFWRNHSNKMKERKERESNPKSLEGENQKMAYVGQQGLEKGNKMVFFEGAKRFELEDLLRASAEMLGKGTLGTVYKAVLDDGSVVAVKRLKEVHIGGKKEFEQRMEVIGRLRHNNIVSLKAYYFARDEKLLVFDYMVNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAAQGVAFIHNHNNNTNLTHGNIKSTNILVDVSGTARVVDFGLSVFTLPSARRSNGYRAPEASDGRKPSQKSDVYAFGVLLMEILTGKCPSAADGGAEVELPKWVQSVVREEWTAEVFDLELMRYKDAEEEMVALLQIALTCTAVVPDQRPKMSHVVKKIEELRGVGDTLDSVSESPSVSEDACGGAAH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi73g00003 639 Gene3D Transferase(Phosphotransferase) domain 1 420 624 - -
Vivi73g00003 639 ProSiteProfiles Protein kinase domain profile. 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi73g00003 639 SUPERFAMILY Protein kinase-like (PK-like) 348 609 IPR011009 -
Vivi73g00003 639 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi73g00003 639 SUPERFAMILY L domain-like 52 222 - -
Vivi73g00003 639 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Vivi73g00003 639 Gene3D Phosphorylase Kinase; domain 1 313 419 - -
Vivi73g00003 639 MobiDBLite consensus disorder prediction 619 639 - -
Vivi73g00003 639 FunFam Nuclear pore complex protein NUP107 31 183 - -
Vivi73g00003 639 FunFam pollen receptor-like kinase 1 314 419 - -
Vivi73g00003 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 614 IPR046959 -
Vivi73g00003 639 Gene3D Ribonuclease Inhibitor 27 90 IPR032675 -
Vivi73g00003 639 Gene3D Ribonuclease Inhibitor 91 233 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi73g00003 34 636 Receptor kinase-like Gene Family AT1G68400 61.526 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi73g00003 Pkinase 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi73g00003 - - cam:105851082 806.208