Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi739g00010 ATGTCTTTTCAGAACAAAGGCTTCTGGATGCCCCGGGATGCCGGCTGCATAGCTGAAGAAAGTGGTGGATATGAAAATTCTCCAAGAGTTGAACCAAAGAGAAGTCACCAGTGGCTTACAGATACAGGTGAACCAGAAATATTTAGCAACAAGAAACAAGCCATTGAAGCTAGTAGTAGTGACATGCCGGTTTCAACAACCAATGCTTCTCACTGGGACACTAGTTCAGGATTTCACTCAGTGACAGGCCAATTTTCTGACCGTCTCTTTGGATCTGATCTTATACGATCAGTCAATTCAGTTGATAACAATATGTCATCAACTGGAAGTGGAAATCTGAACATTGGAGGAAGACAGAGTTTCGGTAATCAGTATGGTAATGATCCATCTGTCAGACTGTCGGTATCACCCACCATGTTAGGCCCTTCACCATGTCTAAATTTTGGTGGTATTAGGAAAGTTAAAGTTAATCAAGTCAGGGATTCTGACCATGGCATGCCAGCTGACAATAATACGTTTTCGATAGATTCTGGTTACGATAAGAATGATGGGAATATTACATCGGGTCCATCTTATAGCAACGGAAGCGACAATGCCGACAACACCGTTGTTATAGGGATAAGCAAGCCCGGTGACAATCTCCTTGCAATGGGTCACATCTTCAATAAAGGGGATGGGAATTTTATGTTGATGGGTAACAATTATGGAAAGGGAGATGAAAATATTTTATCAACGGGTCGGCCCGTTGAAAGAGGCGACGGAAATTTCATAACAATGAATCAGTCATTTGGGAAGGAAGATGGAAATTTGATCTCTCTGGGCACCTCATATTCCAAGGAGCATGAGAGCTTTCCATCAATGGTTTTAACCTCTGGTAACTCGGGAGAAAATTTCACAACTGTTGCTCCTTCCTATGACAACGGCGCCGATCATTTATCATCAATAGGTCCGGCATATGTTAATGTGGATTCAAACGTTGCTTCAACTAGTCCATCGTTTGACAGCAACAACCCTAGCTTTTTACCTGCAAGTCAAAACCTCGGTAACACCAGTACTGCATCTTTTGGAGGTTTTCATGCTGGCCCTGAGCCGAACCCCTCTGGCGGAGTCTTCAGTGGATTTGATCCTTTGATGGGCAACCAAAACTCGGCTCAAGGTGCAGCTTTCCAGAGGGGTCAGATTGAATCAAACCCTGATCCACTTGTAAATAACATTTCAAAATCTAAAAATAATACCATTGTTAAGAACAAAGAACCAAAGACGGCCAAGAAGGCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATCTTTGACGGCATTTCGGTGAAATATTGTACATGGTCAAGGGAGAGAAATCTTCAAGGAATCATAAAAGGAACGGGGTACATGTGTTCATGTGACGACTGTAAGGGGCAAAAGGCTCTTAATGCTTATGAGTTCGAGCGTCATGCTGGAGCCAAGTCAAAACACCCTAACAATCACATATTCTTTGAGAATGGAAAATCCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAAGAGATGCTTTTTGACGCTATTCAAACCGTGACAGGTTCCACCATCAACCAAAAGAACTTTCGCTTTTGGAAAGCGTCATACCAAGCTGCTACCCGTGAGCTTCAGCGCATCTATGGAAGGGATGACGCGGTCATACCATCGTAA 1704 0.4296 MSFQNKGFWMPRDAGCIAEESGGYENSPRVEPKRSHQWLTDTGEPEIFSNKKQAIEASSSDMPVSTTNASHWDTSSGFHSVTGQFSDRLFGSDLIRSVNSVDNNMSSTGSGNLNIGGRQSFGNQYGNDPSVRLSVSPTMLGPSPCLNFGGIRKVKVNQVRDSDHGMPADNNTFSIDSGYDKNDGNITSGPSYSNGSDNADNTVVIGISKPGDNLLAMGHIFNKGDGNFMLMGNNYGKGDENILSTGRPVERGDGNFITMNQSFGKEDGNLISLGTSYSKEHESFPSMVLTSGNSGENFTTVAPSYDNGADHLSSIGPAYVNVDSNVASTSPSFDSNNPSFLPASQNLGNTSTASFGGFHAGPEPNPSGGVFSGFDPLMGNQNSAQGAAFQRGQIESNPDPLVNNISKSKNNTIVKNKEPKTAKKASNNFPSNVKSLLSTGIFDGISVKYCTWSRERNLQGIIKGTGYMCSCDDCKGQKALNAYEFERHAGAKSKHPNNHIFFENGKSIYAVVQELKNTPQEMLFDAIQTVTGSTINQKNFRFWKASYQAATRELQRIYGRDDAVIPS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi739g00010 567 Pfam Tify domain binding domain 460 515 IPR032308 -
Vivi739g00010 567 PANTHER AUTOIMMUNE REGULATOR 8 515 - -
Vivi739g00010 567 MobiDBLite consensus disorder prediction 164 195 - -
Vivi739g00010 567 MobiDBLite consensus disorder prediction 161 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi739g00010 420 548 PHD Transcription Factor Family AT3G53680 53.846 3.32e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi739g00010 - - gmx:100782217 783.097