Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi733g00008 ATGGACAACATTCTAGGCCTTATCAGAATTCGTATCAAAAGAGGCACTAATCTCATAGCTCGTGATTCTCGTACCAGTGACCCTTATGTTGTTGTCACCATGGCTCAACAGACACTGAAAACTGCTGTTGTGAAAGATAACTGTCACCCCGAATGGAACGAAGAATTGACACTTTATATTCAAGATGAAGATCTTAAAACAAACACACCAATACAACTTACCGTTTGCGACAAGGACACGTTCAGTGTGGACGATAAAATGGGCGAAGCGGACATAGACATAAAGCCGTATCTTCAGTGTGTGAAGATGGGGCTGACCGATCTCCCGGAAGGACATGTTGTCAAGATGGTTCAACCAGATAGGACTAACTGTTTAGCCGAAGAGAGTAGATGCATATGGAGAAACGGAAAACTCGTCCAAGAAATGAGTTTACGGTTGAAAAATGTTAAGTCTGGTGAAATATTCGTCGAAATTGAATGGATGGATGTTACAGATTCCAAAGGCTTATCCGAGTTTGAGTTATAG 525 0.4171 MDNILGLIRIRIKRGTNLIARDSRTSDPYVVVTMAQQTLKTAVVKDNCHPEWNEELTLYIQDEDLKTNTPIQLTVCDKDTFSVDDKMGEADIDIKPYLQCVKMGLTDLPEGHVVKMVQPDRTNCLAEESRCIWRNGKLVQEMSLRLKNVKSGEIFVEIEWMDVTDSKGLSEFEL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi733g00008 174 Pfam C2 domain 7 96 IPR000008 -
Vivi733g00008 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 167 IPR044562 -
Vivi733g00008 174 Gene3D C2 domain 5 110 IPR035892 -
Vivi733g00008 174 SMART C2_3c 7 106 IPR000008 -
Vivi733g00008 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 162 IPR035892 -
Vivi733g00008 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi733g00008 39 170 C2H2 Transcription Factor Family AT1G70790 54.478 7.92e-45 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi733g00008 - - gmx:100781585 263.462