Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi732g00011 ATGGCATCCAGAAGATATCAGATTGGAAGAATGGATGAAGCAAACCATCCAGACTCCATAAGAGCAACCGTAGCTGAATTCTTCTCCACTTGCATCTTTGTCTTTGTTGGAGAAGGCTCCGCCCTTGCTCTAAGAAAGATATACAAAGATGAAGGGGCATCAGCAGGTGAGTTGGTGGTACTTGCACTAGCTCATGCTTTTTCACTATTTGCCGCTATTTCTGCTAGCATGCATGTATCAGGTGGCCATGTGAATCCTGCTGTCACTTTTGGTGCTCTTGTTGGTGGTAGAATCTCAGTTCTTAAAGCTGTTTATTACTGGATTGCTCAGCTTCTCGGTTCTGTTGTAGCTTCTCTCTTATTGAGGCTTGTCACTAACAACATGAGACCACAGGCCTTCAATCTGGCGATAAATGTTGGTGCCGGGCACGGGCTACTACTCGAGATTGCGATGACATTCGGTTTAATGTATGTTGTATATGCCACAGCCATTGATCCCAAAAGAGGCACCATTGGCTCAATTGCACCCTTAGCAATTGGACTTGTTGTTGGAGCAAATGTTCTAGCTGGTGGTCCATTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCTTTGGTGGGCTGGAGATGGGATTACCATTGGATCTTCTGGGTGGGTCCATTGATTGGAGCAGCAATAGCAGCGGCTATATATGAGTATATTATGGTTCCAACTGTGCCTTCTCAGACTCATCCTCAACATCAACCTTTGGTTGCTGAAGATTACTAG 777 0.4595 MASRRYQIGRMDEANHPDSIRATVAEFFSTCIFVFVGEGSALALRKIYKDEGASAGELVVLALAHAFSLFAAISASMHVSGGHVNPAVTFGALVGGRISVLKAVYYWIAQLLGSVVASLLLRLVTNNMRPQAFNLAINVGAGHGLLLEIAMTFGLMYVVYATAIDPKRGTIGSIAPLAIGLVVGANVLAGGPFDGACMNPARAFGPALVGWRWDYHWIFWVGPLIGAAIAAAIYEYIMVPTVPSQTHPQHQPLVAEDY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi732g00011 258 PANTHER AQUAPORIN-8 7 241 IPR034294 -
Vivi732g00011 258 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi732g00011 258 FunFam Probable aquaporin TIP1-1 4 251 - -
Vivi732g00011 258 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Vivi732g00011 258 SUPERFAMILY Aquaporin-like 13 249 IPR023271 -
Vivi732g00011 258 Gene3D Glycerol uptake facilitator protein. 5 245 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi732g00011 2 258 Major Intrinsic Protein MIP AT1G73190 66.667 5.61e-117 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi732g00011 K09873 - gmx:100814469 415.231