Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi732g00002 ATGGACACAACTCAATGGCCTCAGGAGATTACGGTGAAGCCACTAGCCACAAACACAACTGAAAAGAAACCAAGGCCAGAAAAACAAGCTATTAACTGTCCAAGGTGCAATTCACTCAACACAAAATTCTGTTACTACAACAACTACAGCTTAACTCAACCAAGATACTACTGCAAAACATGTAGAAGGTACTGGACTCAAGGTGGAACCATTCGAAACATTCCTGTTGGGGGTGGAACAAGAAAAAACAACAAAGTCATGAGAACTTCCTCTAATCTTGTTCCAAACGAAACAAAAAACCTAGTACCTAGTATTCTTGTTCCAAATGAAACAAAAAACCTAGTACCTAGTATTCTTGTTCCTAGTTCTCAAAATCCAAACCATCATGGAAAAGGACAAGATCTGAATTTGGATTTCAGTACTGCTGCTTCTTGTCACAATTTTCCAGCAATGGAGGTTCTTACTGGGATAAATTCTTCAAGCTCAAGGGGGTTTCATTCTTTTATGCCTGTTCAACTTCAAGGCACTAATGTTGGGTTTCCTTTGCAAGATTTTAAGCAAGTGCCAATGAATTTCTGTTTGGATGGGATTGGTGGAAATGGTTATGCAAATGAAGGAAGGGTTTGTAGCAATGATAACCCAATATTGGGTTTGGATCAGAATAGTATTAAGGGAGATCAACAAGGTTATACAAGTGGATTTTGGAATGGAATGTTGGGAGGTGGAGGATATAATGGTAATTAA 744 0.3858 MDTTQWPQEITVKPLATNTTEKKPRPEKQAINCPRCNSLNTKFCYYNNYSLTQPRYYCKTCRRYWTQGGTIRNIPVGGGTRKNNKVMRTSSNLVPNETKNLVPSILVPNETKNLVPSILVPSSQNPNHHGKGQDLNLDFSTAASCHNFPAMEVLTGINSSSSRGFHSFMPVQLQGTNVGFPLQDFKQVPMNFCLDGIGGNGYANEGRVCSNDNPILGLDQNSIKGDQQGYTSGFWNGMLGGGGYNGN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi732g00002 247 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 161 IPR045174 GO:0003700|GO:0006355
Vivi732g00002 247 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Vivi732g00002 247 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Vivi732g00002 247 Pfam Dof domain, zinc finger 29 85 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi732g00002 22 243 C2C2-Dof Transcription Factor Family AT3G61850 39.231 2.71e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi732g00002 zf-Dof 6.3e-32 No_clan