Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi730g00021 ATGAAAGTTATGAACTTTTCTTGTGGTGTAACAAAACCCAATTTTCCGCTTTCCCAAACAGAAATGCCAATTTTAACATCATTTGGTCATTCTAAGTTGACTGCTACCCTAGCTTTTCAATTGCCATGTATTTGTGTTAGGAAGATGAGGTTGATTACAAAGCTTCAGTGTTCTGTTGCTAGTAGGATGTTTACTTCTAGCACCGGTGGTTCGCAGGGACCTAAACGGGGAGGTCCCTCGTCGTCGTATGTTGGTTACGCTCGTCCTAGTTTAAATGAAATGAAGAAAGATAAGGTGGCGATGCGTGAAAATGTTTACGAGTTCTTGCGAGGAATTGGCATTGTTCCGGATGAGCTTGATGGTCTTGAGCTTCCTGTTACGGTTGATGTTATGAAGGAGCGTGTGGATTTTCTTCATAACTTGGGGCTTACGATTGAAGATATTAACAACTATCCTCTTGTTCTTGGTTGTAGCGTCAAGAAGAACATGGTTCCTGTGCTTGATTACCTCGGTAAATTGGGAGTTAGGAAATCCACGTTGACGAAGTTTTTGAGGAGATACCCGCAAGTGCTTCATGCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTTAGGTATCTTCAAGGGATGGATATCAAACCCAATGATGTTCCTCGTGTTCTTGAGAGGTATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACTATGAGCACATCAGTTGCTTATTTGATTGGAATTGGTGTTGGAAGAAGAGAACTCGGAGGTGTCTTAACTAGATACCCGGAGATTTTGGGGATGCGGGTTGGTCGAGTCATCAAGCCTTTTGTGGAGTATCTAGAAAGCTTGGGTATTCCAAGGCTAGCCATTGCTAGACTAATAGAGACACAACCATATATTCTTGGATTCGATCTCGACGATAAGGTGAAGCCAAACGTCAAATCCCTCGAAGAGTTTAATGTTCGGCAAACATCAATTGCCTCGATAATCGCTCAGTATCCTGACATCATTGGAGCTGACCTAGAGCCAAAGCTCGCCAATAAGAAAAGCATTCTCAATTCTGTACTTGATTTAGATCCTGAGGATTTTGGCTTAATCGTTGAGAAAATGCCACAGGTAGTAAGCCTCAATAGTACACCTATGCTAAAGCATGTTGATTTTCTTAAGGAATGCGGATTTTCTGTGGTGCAAATGAAGAAGATGATTATTGGGTGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTTGATTACTTCCAAAGTGAGATGGAACGGCCTTTGGAAGACTTGGTTGAATTCCCAGCATTTTTCACTTATGGTTTGGAGTCAACTATAAAACCTAGGCATACCATGATTGCAAAGAAAGGATTGAAGTGTTCACTGGCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAGCGGATGGATTATGACACTATTGACATGGAAGAGATGGAAATGAAACCATCTTTTGACATGAACTCATTGATGCGACCAAGGAATGATGAATCGGATTCTGATTATGAATACAGCGATTCTGATGATGATGATGATGATGATGAAGAGTGA 1578 0.4138 MKVMNFSCGVTKPNFPLSQTEMPILTSFGHSKLTATLAFQLPCICVRKMRLITKLQCSVASRMFTSSTGGSQGPKRGGPSSSYVGYARPSLNEMKKDKVAMRENVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLHNLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTLTKFLRRYPQVLHASVVVDLVPVVRYLQGMDIKPNDVPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDDKVKPNVKSLEEFNVRQTSIASIIAQYPDIIGADLEPKLANKKSILNSVLDLDPEDFGLIVEKMPQVVSLNSTPMLKHVDFLKECGFSVVQMKKMIIGCPQLLALNIDIMKLSFDYFQSEMERPLEDLVEFPAFFTYGLESTIKPRHTMIAKKGLKCSLAWMLNCSNEKFEQRMDYDTIDMEEMEMKPSFDMNSLMRPRNDESDSDYEYSDSDDDDDDDEE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi730g00021 525 FunFam Transcription termination factor MTERF4, chloroplastic 269 483 - -
Vivi730g00021 525 MobiDBLite consensus disorder prediction 510 525 - -
Vivi730g00021 525 MobiDBLite consensus disorder prediction 491 525 - -
Vivi730g00021 525 SMART mt_12 325 357 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 217 248 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 362 392 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 429 460 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 397 428 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 PANTHER CGI-12 PROTEIN-RELATED 166 477 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 FunFam Transcription termination factor mterf4, chloroplastic 131 268 - -
Vivi730g00021 525 Pfam mTERF 167 475 IPR003690 GO:0003690|GO:0006355
Vivi730g00021 525 Gene3D Transcription termination factor 3, mitochondrial 272 484 IPR038538 -
Vivi730g00021 525 Gene3D Transcription termination factor 3, mitochondrial 131 271 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi730g00021 mTERF 1.4e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi730g00021 K15031 - gmx:100785223 783.482