LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi730g00015	ATGGCTTCCATAACCTTTTTCATCCTCATATTCTACTTCTTGTTCAATCTAGTTTTTTCATCTAGTCAAGTTCCAATCAATGTAACCAAACACTTCTCCTTCAAAGATTTCACTTTCACCAACAACTCTAGATTAGTCCATGATGTAAAGCTTCTAGGAAGTGCAAGATTCTCAGATGAAAAAGGTTCACTTCAAATCCCAAATGAATCACAAGAAACAGGTATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTCCCGATTCGTCTGTTAGATCCGATCACCAAAACTCCGGCTTCTTTTCAAACCACCTTCTCATTTCAGCTTAATAATTCAACTACTAGTGATTCTGATTTAACTGATAATGGTGGTGGAAGTGGACTTACCTTCATTATTGTACCTGATGAGTTCACAGTTGGAAGGCCGGGACCTTGGCTTGCTATGCTTAATGATGCTTGCGAGAGCGATTATAAAGCGGTTGCAGTTGAGATCGATACACGGATGAATCCTGAATTCGGTGATCCGAATGATAATCATGTTGGTATCAATTTAGGTAGTATAGTATCTACTAAAATTATCAATGTTTCTGATGTTGGTGTTTCGCTTAAAGATGGTTTTGTCCATCATGCTTGGATTGATTATGACGGTCCTCGAAGGAGAATGGACGTTCGTCTTGGACTTCCGAACGATGAAGTTTATCCTAGCAAGCCTATCTTCTCGGAGTTTATGGATCTTTCGCCTTATCTGAACGAGTATATGTTTGTAGGATTCTCGGCTTCGACGGGGAACCACACACAGATTCATAATATACTTTCTTGGAACTTTACTTCGACTAGTCAAGCTTCTCTTCGCTACCCTTCGTCTGAAACATGTCAAGGTAAGATCTTGCTTCAGAATACTACAGAAACAACAGAAGCTTCCGAGAAGTCTAATAGGAATAAAACTCCGCGAAGCTTTTTGATTTTTGTGGCTTCTGTAGTATTGGCTTTAGCTGTTTTAGCTGGTTTTTACTTTATCAGTAAGCATAGAAAAAGTGCTTCTAAATCGAAGACTTCGATAGAAGATGAGATTCATCGGCCAAGGCCTCCTAACAAACCGCGCAGATTCAGTTTTTCTGCACTTTCCTCTGCTACTAGATCATTCAGTGAGATAGAGATACTTGGAAGTGATATTAGAGGAGTATACTACAGAGGTAGGCTTGGTAGTAATGGAAGCCAGGTAGCTGTGAAAAGATTCTCAGCTCAGTTTCTCAGCACGCATGGATCGGATAAGAAGCGTTTGTTGAAAGAAATCAAAGTCATTAGCCATGTTCGTCACCCGAATTTACTTCCTATAAGAGGCTGGTGTCAGGACAACAATGAAATCATCGCCGTCTATGATTTTGTCCCTAACGGAAGCCTCGATAAATGGCTATTCGGAGCCGGAGTTCTTCCGTGGACGCGACGGTTCAAAGTCGTCAAAGACGTAGCTGACGGATTGAGTTTCTTGCACACTAAGCAACTAGCTCACAAGAACATGAAGTGCAGCAGTGTGTTTTTGGATGTTAGCTTCAGGGCTGTTTTGGGAGATTTCGGATTTATTCTAATGGGAGCAGAATCAAAACAGTTTGAATCGATAGTGTGTAATAGTGCCGATGTATTCGAGTTTGGCGTGATCGTGTTGGAAGTGATAGGTGGAAGGCCAAGGGTGGAGGAAGTAGAGGAAGGAAGATCAGAAGAGAGGAACTTATTGGATTTTGCATGGAACTTGCATGAAACAAATGAGAAAGTGAAGCTTGTTGATAGGAGGATGGGATCATTGATCAATTTGGAGCAAGCGATTCGTGTAATGGAAGTCGGTTTGCTTTGTACTTTGAATGAGAATAAAGGAAGACCTTCCATGGAAGAAGTTGTGGAGCTTCTTCATAACATGGAGAAGCCTCTTCCTGAGTTGCCAAAAACTAGACCTGTAGCTTTGTTTCCTTATAATAGTGCCAACACTGGGCTTTGCAATAATTACTCTTGCACTTTGAAGCTGTGA	2019	0.4101	MASITFFILIFYFLFNLVFSSSQVPINVTKHFSFKDFTFTNNSRLVHDVKLLGSARFSDEKGSLQIPNESQETGIRHQAGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNSTTSDSDLTDNGGGSGLTFIIVPDEFTVGRPGPWLAMLNDACESDYKAVAVEIDTRMNPEFGDPNDNHVGINLGSIVSTKIINVSDVGVSLKDGFVHHAWIDYDGPRRRMDVRLGLPNDEVYPSKPIFSEFMDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQASLRYPSSETCQGKILLQNTTETTEASEKSNRNKTPRSFLIFVASVVLALAVLAGFYFISKHRKSASKSKTSIEDEIHRPRPPNKPRRFSFSALSSATRSFSEIEILGSDIRGVYYRGRLGSNGSQVAVKRFSAQFLSTHGSDKKRLLKEIKVISHVRHPNLLPIRGWCQDNNEIIAVYDFVPNGSLDKWLFGAGVLPWTRRFKVVKDVADGLSFLHTKQLAHKNMKCSSVFLDVSFRAVLGDFGFILMGAESKQFESIVCNSADVFEFGVIVLEVIGGRPRVEEVEEGRSEERNLLDFAWNLHETNEKVKLVDRRMGSLINLEQAIRVMEVGLLCTLNENKGRPSMEEVVELLHNMEKPLPELPKTRPVALFPYNSANTGLCNNYSCTLKL	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi730g00015	672	MobiDBLite	consensus disorder prediction	349	369	-	-
	Vivi730g00015	672	SUPERFAMILY	Concanavalin A-like lectins/glucanases	36	279	IPR013320	-
	Vivi730g00015	672	ProSiteProfiles	Protein kinase domain profile.	381	638	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi730g00015	672	SUPERFAMILY	Protein kinase-like (PK-like)	357	634	IPR011009	-
	Vivi730g00015	672	Pfam	Legume lectin domain	31	282	IPR001220	GO:0030246
	Vivi730g00015	672	FunFam	Putative L-type lectin-domain containing receptor kinase S.7 isoform A	29	285	-	-
	Vivi730g00015	672	Gene3D	Transferase(Phosphotransferase) domain 1	539	652	-	-
	Vivi730g00015	672	Gene3D	Transferase(Phosphotransferase) domain 1	462	538	-	-
	Vivi730g00015	672	Pfam	Protein tyrosine and serine/threonine kinase	385	527	IPR001245	GO:0004672\|GO:0006468
	Vivi730g00015	672	Gene3D	-	28	283	-	-
	Vivi730g00015	672	CDD	lectin_legume_LecRK_Arcelin_ConA	37	278	IPR001220	GO:0030246
	Vivi730g00015	672	PANTHER	-	66	636	-	-
	Vivi730g00015	672	MobiDBLite	consensus disorder prediction	349	363	-	-
	Vivi730g00015	672	ProSitePatterns	Legume lectins beta-chain signature.	160	166	IPR019825	-
	Vivi730g00015	672	Gene3D	Phosphorylase Kinase; domain 1	351	461	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi730g00015	3	653	Receptor kinase-like Gene Family	AT5G55830	31.753	2.11e-95	307

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Vivi730g00015		Lectin_legB	8e-55	CL0004

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi730g00015	-		-	gmx:100781464	1050.04