Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi726g00004 ATGGCAGCGCGACCTCCATCTCCAGCGATATCTCCTTTTCGTCTTCAGATTAACGCAAATTCTAAAAGGGAAAACGAAACCCTAGTTGTAAGCAGAATAGGGTTCGAGAAGAAGAAAGTCGCACTGAAGAGAGAACTAAGGGATTGGGTAGCGCGCCATCTCCCGTGTACGATTCTTCTCCCCAACCTTCACCTTTCTCTTTTCTCTGCGTACAAATCTAACCCTTCTTCGCCTTTTTCGTCGAATTTGCCTTTGATTTTTGGACATCATTCCGGTTTCTCTAATGAGTCTGCTACTCCTCCTAAACCTCATAGGAAAGAGCCCAAGACACCCCACAAGGTTTTGGATGTGCCTTATGATGGTGTTTGTTCTGTCCAGTGGACCAAGGAGGGTTCTTTCATATCTATTGATTTTGTTTCCATGAAATCGCCGAAAGGGGTGTCTGGAATCGAGAAATATTCGTGCGTGATTGATATGAAGTGCAGTAGTCACAAAGGGTTTTCTGAGAATTCACAAGGTGAGAGGATTTGTAGGATTTGTCATTTGGCTTTTGGACCTGCGTTAGATGCAGCAATTGTCGAAAGTGCGAGCGTTACGAGTGGAGATTTTATTCAACTTGGTTGCGTGTGTATAGACGAGCTCGGCATTGCTCATGTTTATTATGCTGAAGTGTGGTTCAAGCTAAAGGGAAACAGGATCAGGCTTCCAATGTTGACGTTCTTCTAA 726 0.4421 MAARPPSPAISPFRLQINANSKRENETLVVSRIGFEKKKVALKRELRDWVARHLPCTILLPNLHLSLFSAYKSNPSSPFSSNLPLIFGHHSGFSNESATPPKPHRKEPKTPHKVLDVPYDGVCSVQWTKEGSFISIDFVSMKSPKGVSGIEKYSCVIDMKCSSHKGFSENSQGERICRICHLAFGPALDAAIVESASVTSGDFIQLGCVCIDELGIAHVYYAEVWFKLKGNRIRLPMLTFF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi726g00004 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 234 IPR013083 -
Vivi726g00004 241 PANTHER ZINC FINGER, RING-CH-TYPE 146 233 - -
Vivi726g00004 241 SMART ringv_2 176 232 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi726g00004 171 233 C3H Transcription Factor Family AT5G05830 52.381 1.02e-11 60.5