Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi726g00002 ATGGAACTATCAGATTTGCAAAACAACAAACAGAAGAGAGGCACCACCACTCTTCCCCACCACCAACACCAAAACCAACACCACCAACAACAAGAATCTTCACCTTCAAATTCTCATTCTCAGCAACAACAACTTGTGGTCCCTTTTGATGGAAGGCCACCACAATCTTTCATTATGGGCTCCATCTCTAATATTCAACCTTCTTCAAACTCTTCTTCTTCATCATCCAATTCTTCTTCTTCTTCCGCTTCAGCTTCTGCTGCAACTACTACTCATCTTATCGACGCTTCTCTCGCAATCGCCACCAGATCTGAACCTCCGGTACTCGACTCCACCGCTGCAGCCGCCAACAATAACAACAACAACACTCAGAATCAGATTCAACAATTCTCTTCTTCATCCACGGTCGTCACCGTAGCAAATCCTCCCAAACGATCTACCAAGGACAGACACACTAAAGTGGATGGCCGGGGACGAAGAATTCGAATGCCGGCGACATGTGCGGCTAGAGTTTTTCAGTTGACCAGAGAATTAGGTCATAAATCCGACGGTGAAACAATTGAATGGCTTCTCCAGCAAGCGGAGCCGGCTATTATTGCCGCCACCGGTACAGGAACAATCCCGGCTAATTTCTCAACGCTCAATGTTTCACTACGAAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCGAAATCCGCTCCTCATAGTTTTCACAGCGCGCTTGGACTGGCGGCGCACCATCCGTTTGAAGAAGCTGCGTACCAACACCAACACGCGCCTCTTCTAGGGTTTCATCCTCATCAACACCAACAACATCATCTCATGAACGCCGATCAAATCGGTGAAGCTCTTTCGAATGAGAATTACATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGATAACAACGAAAGCGGTGGCGATGGTTCTTCTTCTCCAAAAACTTTCAAAGCAAATCACCAACAAGATGGTATAGGTGATGGAGAAGGTGGTGGTGGAGGAGGAGGTGGTGGAGATGGAGCATCTTCATCTGCTTCTCCTGGTAATTCAATTTCTGGACTTCTTCGACCGTCGAATATGTTACCGGCAACCGCGATGTGGGCCACCGCGGGTAGTGGTAGTACAATATGGATGGTACCAGTGAGTGGTGGCGGTGGCGGTGGTGGTGCAAACACAAATTCAGATACACATACACAAACACAAAACATGTGGCCATTTAGTCCTCACACTCAGTCTCAAAACCAAGCAAACGCTACTGCAACACCGTCTCAGTTACATTTCATGCCAAGGTTCAATGTTCCTCCCGGCGGAAGCGGCGGTGGTATTGAATTCCAAGGCGGACGCGGTGGTTTACAGCTCGGTTCAGTGTATCAACCATCACAGCATCTTGGATTAGCAGTGTCTGATTCAAACTTGGGTATGTTGGCTGCTCTAAATGCTTACACAAGAGCTGGTCATTTCAATGTTAACAACAACTCTTCTTCTGATCATCATCATCATCAACATCAACAACATCACCATTCAATTTCATTGGACTCTCATCCTCAACAACCTAATGATGAAAGTGGAGAAGATGCTCCTAATAATTCTCAATGA 1599 0.4697 MELSDLQNNKQKRGTTTLPHHQHQNQHHQQQESSPSNSHSQQQQLVVPFDGRPPQSFIMGSISNIQPSSNSSSSSSNSSSSSASASAATTTHLIDASLAIATRSEPPVLDSTAAAANNNNNNTQNQIQQFSSSSTVVTVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHSALGLAAHHPFEEAAYQHQHAPLLGFHPHQHQQHHLMNADQIGEALSNENYMRKRYREDLFKDDNNESGGDGSSSPKTFKANHQQDGIGDGEGGGGGGGGGDGASSSASPGNSISGLLRPSNMLPATAMWATAGSGSTIWMVPVSGGGGGGGANTNSDTHTQTQNMWPFSPHTQSQNQANATATPSQLHFMPRFNVPPGGSGGGIEFQGGRGGLQLGSVYQPSQHLGLAVSDSNLGMLAALNAYTRAGHFNVNNNSSSDHHHHQHQQHHHSISLDSHPQQPNDESGEDAPNNSQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi726g00002 532 MobiDBLite consensus disorder prediction 57 83 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 388 422 - -
Vivi726g00002 532 Coils Coil 113 133 - -
Vivi726g00002 532 ProSiteProfiles TCP domain profile. 147 201 IPR017887 -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 305 320 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 1 49 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 130 156 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 299 354 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 1 83 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 511 532 - -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 489 532 - -
Vivi726g00002 532 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 74 476 IPR005333 GO:0003700
Vivi726g00002 532 Pfam TCP family transcription factor 146 296 IPR017887 -
Vivi726g00002 532 MobiDBLite consensus disorder prediction 380 422 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi726g00002 144 472 TCP Transcription Factor Family AT1G35560 44.643 2.28e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi726g00002 TCP 9.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi726g00002 - - vvo:131635606 870.152