Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi723g00005 ATGGATGAAGTTGTCACACAAAGAACAGAGACCCGTCCGCTCCGTGCTGCAGGGAACACTCGCTTGCCAAACTTCATAAGGAGATGGAACAGGCTTTTAGCCATCTTTTGCTTGGTTTCAATATTTATTGATCCTTTGTTTTTCTTCACAATTCATGAAACCAAATGTATTCCTATAAACTGGGTAATAGCAAAAGCTCTGGTTGGAATGAGAAGCATAACCGACTTTGTATTTTTACTAAACATTCTTCTTGAGTTTAGGTTGGCATACGTTTCTCCCAAGTCTAGGGTGGTTGACGGTCCTACAAAAATAGCTCTTAAATATTTTAAGGGTTATTTTCTCATTGACTTATGTGTTGTGATACCTCTTCCGCAGATATTATTCTTATTTCTCCTGCCAAATCCCTCAAAGTCTATTGGAGAACAACATGCAAAGAAGCTCCTTATCATATTGATCCTTGTCCAGTATATTCTCCGGTTGTTCAGATTTCTACCTCTGCTGATTGGCCAGTCTCCATCTGGTTTTATATTTAAGTCTGCTTGGGCGAATTTCGTCATAAATCTTCTCTTTTTCATGCTATTTAGCCATATCGTTGGTTCATGCTGGTATCTCTTTGCTCTACAGAGGGTTGACCAGTGTTTTTTAGAAGCCTGCCATCTTGCCGGTCTACCTGTATGCAAGGCATTGATAGACTGTAATTCTGATTTTCCGGGTATGTCCCCTGCATGGAGAGCTGATTTAGGTGCGGAAAATTGTTTAAACGTCACATCTGGTGATTTCTCGTACGGAATATATGCGAATGCTCTACCGCTGACCGTACAAGCCAGTGTGACGAGCAAATATATATATTCCCTCTTTTGGGGATTTCAGCAACTTAGCACCCTGGCAGGAAAACTGACTCCCAACCATTTTGTGTGGGAAGTCATGTTCACCATGTCCACCATTGGATTGGGACTCTCCCTTTTCGCAGTTCTCATTGCCAATATTCATAATTTTCTCCAAGGTCTCGCACGAAGGAGGCTCGAGATGCAGCAACGAATAAAATGCCGTGACGTGGAGCATTGGATGGGCCGTCGTGGCTTATCTGAAGATATCAAAATAAGAGTAAGAGAAGCTGAACAGAATGCTTGGGAAGAAACACAAGGTGTTCCGGATGAAATGATTCTCTGGAACTTGCCAGAGGGACTCGTGACTGACATACGTCAGTTCCAAGAGAGCGTCGAGCATTCTGTTTAG 1236 0.4248 MDEVVTQRTETRPLRAAGNTRLPNFIRRWNRLLAIFCLVSIFIDPLFFFTIHETKCIPINWVIAKALVGMRSITDFVFLLNILLEFRLAYVSPKSRVVDGPTKIALKYFKGYFLIDLCVVIPLPQILFLFLLPNPSKSIGEQHAKKLLIILILVQYILRLFRFLPLLIGQSPSGFIFKSAWANFVINLLFFMLFSHIVGSCWYLFALQRVDQCFLEACHLAGLPVCKALIDCNSDFPGMSPAWRADLGAENCLNVTSGDFSYGIYANALPLTVQASVTSKYIYSLFWGFQQLSTLAGKLTPNHFVWEVMFTMSTIGLGLSLFAVLIANIHNFLQGLARRRLEMQQRIKCRDVEHWMGRRGLSEDIKIRVREAEQNAWEETQGVPDEMILWNLPEGLVTDIRQFQESVEHSV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi723g00005 411 Gene3D - 29 336 - -
Vivi723g00005 411 Gene3D Helix hairpin bin 340 402 - -
Vivi723g00005 411 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 23 402 - -
Vivi723g00005 411 Pfam Ion transport protein 29 339 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi723g00005 411 SUPERFAMILY Voltage-gated potassium channels 24 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi723g00005 26 402 Ion Channels AT3G17700 50.773 4.69e-119 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi723g00005 K05391 - vvo:131635595 558.525