Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi723g00002 ATGGATGAAGTTGTCACACAAAGAACAGAGACCCGTCCGCTCCGTGGTGCAGGGAACAGTAGCTTGCCAAACTTCATAAGGAGATGGAACAGGCTTTTAGCCATCTTTTGCTTGGTTTCAATATTTATTGATCCTTTGTTTTTCTTCACTATTCATGTGAACAAGGAAACCAAATGTATTCCTATAAACTGGGTAATAGCAAAAGCTCTGGTTGGAATGAGAAGCATAACCGACTTTGTATTTTTACTAAACATTCTTCTTCAGTTTTGGTTGGCATATGTTTCTCCCAAGTCTAGGGTGGTTGACGGTCTTACAAAAATAGCTCTTAAATACTTTAAGGGTTATTTTCTCATTGACTTATGTGTTGTGATACCTCTTCCGCAGATATTATTCTTATTTCTCCTGCCAAATCCCTCCAAGTCAGATGGAGAACAACATGCAAAGAAGCTTCTTATCATATTGATCCTTGTCCAGTATATTTTCCGGCTGTTCAGATTTCTACCTCTGCTGATTGGCCAGTCTCCATCTGGTTTTATATTTAAGTCTGCTTGGGCCAATTTCATCATAAATCTTCTCTTTTTCATGCTATTTAGCCATATCGTTGGTTCATGCTGGTACCTCTTTGCTCTACAGAGGGTTGACCAGTGTTTGATAGAAGCCTGCCACCTTGCCGATCTACCTTTATGCAAGGCATTGATAGACTGTAATTCTAATTTTCCGGCTATATCCGCTGCATGGGGAGCTGATTTAGGTGCAGGAAATTGTTTTAACGTCACATCTGGTGATTTTTCGTACGGAATATATGGGAATGCTCTACCGCTGACCGTACAAGCCAGTGTGACCGGCAAATATATCTATTCCCTCTTTTGGGGATTTCAGCAACTTAGCACCCTGGCAAGAAATCTGACCCCCAACCATTTTGCGTGGGAGGTCATGTTCACCATGTCCATCATTGGATTGGGACTCTCCCTTTTCGCAGTCCTCATTGCAAACATTCATAATTTTCTCCAAGGTCTCGCACGAAGGAGGCTCGAGATGCAGCTCCGAAGCCGTGACGTGGAGCATTGGATGGGCCGTCGTGGCTTATCTGAAGATCTCAGAAGGAGAATTAGAGAAGCCGAACAGAATGCTTGGGAAGAAACACGAGGTGTTCCGGATGAAATGATTCTCCGGAACTTGCCAGAGGGACTCGTGAGTGACTTACGTCAGTTCCAAGAGAATGCCGATCATTCTGTTTAG 1239 0.4318 MDEVVTQRTETRPLRGAGNSSLPNFIRRWNRLLAIFCLVSIFIDPLFFFTIHVNKETKCIPINWVIAKALVGMRSITDFVFLLNILLQFWLAYVSPKSRVVDGLTKIALKYFKGYFLIDLCVVIPLPQILFLFLLPNPSKSDGEQHAKKLLIILILVQYIFRLFRFLPLLIGQSPSGFIFKSAWANFIINLLFFMLFSHIVGSCWYLFALQRVDQCLIEACHLADLPLCKALIDCNSNFPAISAAWGADLGAGNCFNVTSGDFSYGIYGNALPLTVQASVTGKYIYSLFWGFQQLSTLARNLTPNHFAWEVMFTMSIIGLGLSLFAVLIANIHNFLQGLARRRLEMQLRSRDVEHWMGRRGLSEDLRRRIREAEQNAWEETRGVPDEMILRNLPEGLVSDLRQFQENADHSV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi723g00002 412 Gene3D Helix hairpin bin 341 403 - -
Vivi723g00002 412 Gene3D - 31 339 - -
Vivi723g00002 412 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 24 403 - -
Vivi723g00002 412 Pfam Ion transport protein 29 342 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi723g00002 412 SUPERFAMILY Voltage-gated potassium channels 24 342 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi723g00002 26 403 Ion Channels AT3G17700 52.073 2.97e-124 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi723g00002 K05391 - vvo:131635595 634.409