LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi720g00016	ATGGATCCAAACTTCGAAACCACCTTCAAATTCGATGACAATGGTAACTTACTCTCTCTCGATGATTTCACCACCACTGATTCTTATTTCTATCTACCTCATCTTCCTCCACCCGAGTTTGCTCCGAGTTGTTCTAACTCGGAGCCACTCGTTTCACCTACCACTGATCCTTCCGTTGAAGACACTGATTTTTCAGAAACAGTGAAATACATAAGCCAGATTCTCATGGAAGAGGATTTTCAACAAAAACCTTGCATGTGTTATGACCCTCTTAGTCTCCAACATACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAAACTGCCTCTGCCTCTGCCTCTTTCACCTAATCAACACCCTCTTGATTCTGGTAACAGTTCTGGTTCTAATGAGTTGAAGCCTCTTTCTAGTCCTGATACACCGGTTTCAGGTGATTCTGGTTTTAATTCAGTTTCTTATGTGAAGTCTCAATTTATTGGTTTGAATAGTAGTAGTAATAATAACAGTAATAATATAAGTGATGGTGTTTTGGATTTGGATTCTTCTGAGACTAAGCTTTTGGCTCAGAATATTTTTAGTGATGCTGATTCTATGTTGCAGTTTAGAAAAGGGTTGGAGGAAGCTAGTAAGTTTCTTCCTCAAAAGCCTCAGCTTTTTACTGGTTTTGAGAGTGGTAAGACTAGTTTAGTGTCTCAAGAGGCTAAGGGGGGAGTGGGAGGTATAAAGATGGAGGATAGTGTTAGGGAGAATTCAAATTTGAATTCGAATTCGAATTCGAATCTGAGTTATTCGGTTTTGAGTAATTCGAGTTCGTATGGTTTATTGAAGAGTAGGAAGAATCACGAGCGTCAAGGTAGTGAAGATGAAGAAGGGAGAAGTAACAAACAATCAGCGGTTCGCGTTGAGGAAACTGAAATATCTGAGATGTTTGATAGGGTTTTGCTTAGTGTTGAAAATGTGCCGCTGTGTGCTGAACAAAAGGATGGATCGGTGATGGAGAGTAGCGCAGAGGTTCGTGAGCTTGATGGAGGGAAGGCGCGTTCGAAGAAACAAGGGAGGAAAAAGGAAGCTGTGGATTTGAGGACTCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGGTAATGATAACCGGACTGCTAATGAATTGTTTAAGCAGATTCGGCAGCATTCTTCTCCTTCGGGTGATGCTTGTCAGAGGTTGGCTCATTACTTTGCGAATGCGATTGAAGCACGCATGGTTGGTGCCGGTACTGGTACAAAGATATTATATATGAGCCAGAAGATGATTAATGCTGCTGATTACTTGAAAGCATACCAAGTTTTTATATCTGTTTGCCCTTATAAAAAATTTGCGCATTTCTTTGCAAATAAAATGATACTGAAAACTGCTGAAAAGGCGGAAACACTTCACATTATTGATTTCGGTATCTTATATGGTTTCCAATGGCCAATTCTCATCAAGTTTCTGTCAGAAAGAGATGGTGGACCTCCCAAGCTTCGTATCACCGGAATAGAGTATCCTCAAGCTGGCTTTCGACCGGCTGAGAGAATCGAGGAAACTGGACGGCGTTTAGCTAACTATTGTCAGCGTTTCAATGTTTCCTTTGAATACAAGGCCGTACCATCGCGAAACTGGGAAACCATTCAAGTCCAAGACCTTAATATTAAGAGCGATGAGGTAGTTGCTGTGAATTGTCTGGTAAGGTTTAAGAATTTACATGATGAGACAATTGAAGTGAGCAGTCCTAAAGACGCGGTTCTGAAGTTAATCAGGAAGATAAACCCGAGTATATTTGTTCAATCTATAGTAAATGGATCATACAATGCCCCTTTCTTTGCCACACGCTTCAAGGAGTCACTTTTCCATTATTCTGCAATGTATGATATGTTTGACACTCTCATACCCCGTAAAAACGAATGGAGGCTGACGATCGAGAAAGAGCTTTTGGGTCGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGTCATACAAACAGTGGCAGGTGAGGAATCTACGGGCCGGTTTTAGGCAGCTCCCACTTGATAAGGAGATAATGGTCAAATTTAGAGGTAAGCTAAGAGAATGGTACCACAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTATATGCTTCGACTTGTTGGGTGCCTGCATAA	2208	0.4117	MDPNFETTFKFDDNGNLLSLDDFTTTDSYFYLPHLPPPEFAPSCSNSEPLVSPTTDPSVEDTDFSETVKYISQILMEEDFQQKPCMCYDPLSLQHTEKIFFDALESKLPLPLPLSPNQHPLDSGNSSGSNELKPLSSPDTPVSGDSGFNSVSYVKSQFIGLNSSSNNNSNNISDGVLDLDSSETKLLAQNIFSDADSMLQFRKGLEEASKFLPQKPQLFTGFESGKTSLVSQEAKGGVGGIKMEDSVRENSNLNSNSNSNLSYSVLSNSSSYGLLKSRKNHERQGSEDEEGRSNKQSAVRVEETEISEMFDRVLLSVENVPLCAEQKDGSVMESSAEVRELDGGKARSKKQGRKKEAVDLRTLLVLCAQAVSGNDNRTANELFKQIRQHSSPSGDACQRLAHYFANAIEARMVGAGTGTKILYMSQKMINAADYLKAYQVFISVCPYKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSERDGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCQRFNVSFEYKAVPSRNWETIQVQDLNIKSDEVVAVNCLVRFKNLHDETIEVSSPKDAVLKLIRKINPSIFVQSIVNGSYNAPFFATRFKESLFHYSAMYDMFDTLIPRKNEWRLTIEKELLGREIMNVVACEGFERVERPESYKQWQVRNLRAGFRQLPLDKEIMVKFRGKLREWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA	735

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi720g00016	735	ProSiteProfiles	GRAS family profile.	351	733	IPR005202	-
	Vivi720g00016	735	MobiDBLite	consensus disorder prediction	276	300	-	-
	Vivi720g00016	735	Pfam	GRAS domain family	360	732	IPR005202	-
	Vivi720g00016	735	MobiDBLite	consensus disorder prediction	112	146	-	-
	Vivi720g00016	735	MobiDBLite	consensus disorder prediction	118	146	-	-
	Vivi720g00016	735	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	290	728	IPR005202	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi720g00016	67	735	GRAS Transcription Factor Family	AT1G07530	48.939	0.0	620

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Vivi720g00016		GRAS	4.6e-116	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi720g00016	-		-	cam:101504630	1123.61