Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi720g00002 ATGTCTTCTTCACCCACTTTGAAAGGATTTGTGCCACTTGACACCAATGCTCTTTATGATCTCCTTGGAAAAACAGTTGAAGAAATTGAAGCGGTTGATAACAAAATTCCACATGCAGAACTGTTTCCAGAAATTAATGTTGGTAGTACGTCCACCCCAGTTGAAGCTGTCAATGCAAGTAAATTGGGCAAAGATGAAGCAATGATGAATGAAGGGAATCAGGAAGACGATGTTGGAGAATTTGCTGATACTAATAGCAACAATGGAGGGCTGCAGAAAGACATATTTTGGGACAAAGATATCACCAAGGCAAGGAAGAAGGGAAATCAAGTTATGCATTTTCCAGCAGAAGTGATAAAAAAGGCTCTTCGTCCGGACATAACTTCGTGCACTATGATGGATCTCGAGACTGCTGAATATTATGACTGTAAAATCATCAAATCGAACAGGAAGTATGTGGAAATGTATCTTGCAGAAGGATGGTATTCATTTGCAAAAAACAAAAAACTGAATGTTGGAGATAAGCTGATTTTCCGCTATAATTCAGAGAAAGAAATTCTGCATGTCAAGGTGTTCAGAAAAGATGTAAAGAAGCAAAACTGA 603 0.3831 MSSSPTLKGFVPLDTNALYDLLGKTVEEIEAVDNKIPHAELFPEINVGSTSTPVEAVNASKLGKDEAMMNEGNQEDDVGEFADTNSNNGGLQKDIFWDKDITKARKKGNQVMHFPAEVIKKALRPDITSCTMMDLETAEYYDCKIIKSNRKYVEMYLAEGWYSFAKNKKLNVGDKLIFRYNSEKEILHVKVFRKDVKKQN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi720g00002 200 CDD B3_DNA 143 193 IPR003340 GO:0003677
Vivi720g00002 200 Gene3D - 82 196 IPR015300 -
Vivi720g00002 200 ProSiteProfiles B3 DNA-binding domain profile. 97 195 IPR003340 GO:0003677
Vivi720g00002 200 SUPERFAMILY DNA-binding pseudobarrel domain 96 197 IPR015300 -
Vivi720g00002 200 SMART B3_2 101 195 IPR003340 GO:0003677
Vivi720g00002 200 Pfam B3 DNA binding domain 111 194 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi720g00002 B3 1.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi720g00002 - - vvo:131624812 400.208