Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi719g00017 ATGGACAGGTTAGAAATGATGATTACATTCCACATGAGAGTTTTGTTCTTTTTCCTTTGGATCTTTCTCTCTTCATTTGGTAAAAGCCTGTTAACCTGTGAAACAACATCACCACATGATTCTAGCTACCATTGTAATGAAAATGAGTTACAAAATCATCATTGTGAAACATTTGCACTCTTTTTCACAAACTCTCATTTTTCCTCCCTCTCCAACCTCACCCTATACTTAGGACTCAACAGGTTCTCCATAGCAGAAACCAATGGTTTCTCCGCGGAAACCGAGTACCTTCCTCGAAACCATCCTCTTCTTATACCAATTGATTGCAAATGCAAAAAAGGCGGTTATTTTCAAGCTGAATTGACAAAAACTACCATCAAAGGTGAGAGTTTTTATGACATTTCTCAATCACTTGAAGGCTTAACTACTTGCAAGGCTATTAAAGATAACAACCTTGGTGTCTCACCTTGGAACCTTGATGCTAATCACAAATTGATCATCCCTTTGAAATGTGCCTGCCCTTTTTCTTCCTTTGTCATACCAAAACCAAAACTTCTTCTTTCTTATCCTATAAGTGAAAATGATACTATTTCAAATTTGGCCTTAAAGTTCCATATTACAAAAGAAGCTATTCTTATTGCCAATAACCTCTCATCATCATCTTCAGAAGTTCTTAGAATTAGAAGCTTAGAGCCTTTTACCTCTATTCTAATTCCATTGAATGCTAACCCTTTCCTTGATCCTTTAACTAAGCCAAAACAACCGAATTCGGATTTTCCAAGAACTAACAATATTTCAGGAATTAGGCCACATAAGAAGTCAAAAATGAAAAAGAGTGAGCTTTTTATTGGCCTAATTGGTGTTGCAATTGGAGTTTTCTTTTCCGTCGTAGTAACCGTTTTCTTCATTTGGTTGAAGAAAAGAAAGGTGGAAGAAAATTCATGCAAAGAAAGAGATATGGAGCTACAACATCTGAATCAAAGTGTGAGAACCACAAGTGATAAGAAAGTTTCATTTGAGGGGTCACAGGACACTCTTGATAGTAAAATCATCGATGCAACGTCGCGTAAGATGTTGTTGGAGACATACACAATTGAGGATTTGAGAAAAGTGACAGAAGATTTCAGCTCAAGTTTTCACATTGAAGGGTCAGTTTTTCATGGTTGTTTAAATGGTAAGAACTTGGCAATCAAAAGAGTAAAAACCGAAATTCTGTCAAAATTAGAACTTGGCCTTTTCCATGACTCACTTCATCATCATCCAAACATATTGAACCTTCTTGGTTTAAGTATCTCAGAAGAGTCATCGGAGTCGGAATCTTTCTTGGTTTTAGAGTATGCTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAGTTCATTGCTTCTTGCTACTGTTTCTTGAATTGGAAGCAAAGGCTTAGAATTTGTGTTGATGTGGCTAGTGCTTTGGATTACATGCACAATATTATGAGTCCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTTTTAGATGAAGAGTTTGGTGCAAAGTTAGGAAATTTTGGGATGGCAAGTTTTGTTGTGAATGAAACTGAGGACCCTCAATTTTATTCAAGCAATTATGCTTCTTGGAGCATTGGTTATTTAGCACCTGAATATGTTCACCAAGGTGTGGTTTCAACAAGCATTGACATCTTTGCATTTGGTGTGGTTTTGTTAGAGGTTTTATCTGGTCAAACACCTATAAATGGATCAAGTGATAGAGGTGAAGGGAGTGTTTGGCTTAGTGACAAAGTAAAGAGTATTTTGAAGTCAGAGAATGGTGATGTGAATGAGTTGTTAAGAGAGTGGATAGACAGTGCATTAGGTGAGAGTTACTCATTTGATGAAGCTTTGAAAGTTGCTAATATTGCAAAAGCTTGTGTGGAGGAAGATGCATGTTTGAGGCCTAATGCAAGAGAAATTGTTGAGAAGCTATCAACATTGTTGTTGGAGGAATTACCTAATGAGGAAAATCAAGTTTTGATGAGTGAAAATTCTTGCAAACCTCTTGTGGATGCACTAGGAAGCAATATGTGA 2088 0.3678 MDRLEMMITFHMRVLFFFLWIFLSSFGKSLLTCETTSPHDSSYHCNENELQNHHCETFALFFTNSHFSSLSNLTLYLGLNRFSIAETNGFSAETEYLPRNHPLLIPIDCKCKKGGYFQAELTKTTIKGESFYDISQSLEGLTTCKAIKDNNLGVSPWNLDANHKLIIPLKCACPFSSFVIPKPKLLLSYPISENDTISNLALKFHITKEAILIANNLSSSSSEVLRIRSLEPFTSILIPLNANPFLDPLTKPKQPNSDFPRTNNISGIRPHKKSKMKKSELFIGLIGVAIGVFFSVVVTVFFIWLKKRKVEENSCKERDMELQHLNQSVRTTSDKKVSFEGSQDTLDSKIIDATSRKMLLETYTIEDLRKVTEDFSSSFHIEGSVFHGCLNGKNLAIKRVKTEILSKLELGLFHDSLHHHPNILNLLGLSISEESSESESFLVLEYAKNGSLKDWLHGGLAIKNQFIASCYCFLNWKQRLRICVDVASALDYMHNIMSPSYVHRNVKSRNIFLDEEFGAKLGNFGMASFVVNETEDPQFYSSNYASWSIGYLAPEYVHQGVVSTSIDIFAFGVVLLEVLSGQTPINGSSDRGEGSVWLSDKVKSILKSENGDVNELLREWIDSALGESYSFDEALKVANIAKACVEEDACLRPNAREIVEKLSTLLLEELPNEENQVLMSENSCKPLVDALGSNM 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi719g00017 695 ProSiteProfiles Protein kinase domain profile. 365 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi719g00017 695 Gene3D Transferase(Phosphotransferase) domain 1 448 684 - -
Vivi719g00017 695 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 667 - -
Vivi719g00017 695 Pfam Protein tyrosine and serine/threonine kinase 409 662 IPR001245 GO:0004672|GO:0006468
Vivi719g00017 695 ProSiteProfiles LysM domain profile. 187 238 IPR018392 -
Vivi719g00017 695 SUPERFAMILY Protein kinase-like (PK-like) 362 662 IPR011009 -
Vivi719g00017 695 FunFam PTI1-like tyrosine-protein kinase 3 447 676 - -
Vivi719g00017 695 Gene3D Phosphorylase Kinase; domain 1 378 447 - -
Vivi719g00017 695 Pfam LysM domain 127 168 IPR018392 -
Vivi719g00017 695 Pfam LysM domain 191 224 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi719g00017 43 688 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 41.133 2.19e-140 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi719g00017 PK_Tyr_Ser-Thr 4.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi719g00017 - - tpra:123891373 1125.54