Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi718g00010 ATGATTATCCCAGTGGCAGCAACATCATCCTCTGCCTGCAAACAAGAACTGCCTCTAATAAATTTCCAAAAGGGACTCACCAAAATGGAGTCATTATTTCACAATCGAAACAAAGATAAGGTGGTAGTAATAATGGGGGCCACAGGTACTGGAAAGACCAAATTAGCCATAGATTTGGCCAAACATTTTCAACCATCTGAAATTGTTAATTCAGATAAAATACAAGTTTATAAAGGTCTTGACATAACAACAAATAAGGTCACAGAAGAAGAATGTGATGGGGTCCCACATCATCTCTTGGGTTTATTTGATCCTACAACAAATTTCACTGCCAATGATTTTTGTTACCATGCTTGTTCAGCTATTGATTCAATTGTGCAAAAAGATGGGTTGCCTATTATTGCTGGTGGTTCAAACTCTTATTTAGATGCCTTGGTGAATCATTGTACTGAATTTAGGTTAAGGTATGAGTGTTGTTTTCTTTGGGTTGATGTTGCACTTCCGGTCCTTCATTCTTCGCTTCAATCGCGCGTTGATCGTATGATTGAAGCTGGTCAAGTAGATGAAGTTCGTGAATTTTTTGACCCGTTGGGTGATTATACAAAAGGGATCCGAAGAGCTATTGGAGTGCCTGAATTTCATGATTTTCTTATGGCGGAAGCAAATTCAGCGGATGAGAGAATTAAGAAGAAGCTTCTTGAAGCTGCTATTGCTAGGGTTAAGATTAATAATTGCACTCTTGCAAATCGACAACGTCAAAAGATTCAACGGTTAAATGGAATGTGGAAAAGGAGCATGCATCGTCTTGATGCCACTGAAACTGTTATTAGAAGTGGAACACTGGCTCGTAAGGAAGCATGGGAAGATCACGTACTCTCAAAGAGTCTTGTGATCCTTTACAACTTCCTTTACGGTGAAACACATGTTCGCTCAAAAAATATTTTACCTAAAAATATAATTAATTCTCTTTCTGGATCACAAACGAGACTTGCATTGTCGGGTGTTGCGGCAGCAACCCATTAA 1023 0.3881 MIIPVAATSSSACKQELPLINFQKGLTKMESLFHNRNKDKVVVIMGATGTGKTKLAIDLAKHFQPSEIVNSDKIQVYKGLDITTNKVTEEECDGVPHHLLGLFDPTTNFTANDFCYHACSAIDSIVQKDGLPIIAGGSNSYLDALVNHCTEFRLRYECCFLWVDVALPVLHSSLQSRVDRMIEAGQVDEVREFFDPLGDYTKGIRRAIGVPEFHDFLMAEANSADERIKKKLLEAAIARVKINNCTLANRQRQKIQRLNGMWKRSMHRLDATETVIRSGTLARKEAWEDHVLSKSLVILYNFLYGETHVRSKNILPKNIINSLSGSQTRLALSGVAAATH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi718g00010 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 266 - -
Vivi718g00010 340 FunFam Adenylate isopentenyltransferase 5, chloroplastic 167 266 - -
Vivi718g00010 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 302 IPR039657 -
Vivi718g00010 340 Gene3D - 38 303 IPR027417 -
Vivi718g00010 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 180 IPR027417 -
Vivi718g00010 340 Pfam IPP transferase 155 253 - -
Vivi718g00010 340 Pfam IPP transferase 75 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi718g00010 155 307 C2H2 Transcription Factor Family AT2G27760 31.844 9.88e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi718g00010 K10760 - gmx:100812928 477.633