LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi717g00006	ATGGATGCCACTCACACCATGTTTTGTAACAATGATCTTGTTAACCCTCTTAGCTCAATGGGCATGCAAGTTTCATGCATTCTTGTTGTATCACATTTCTTCAATGTCCTCCTTAGAAGTTTGGGTCAACCTGGTCCTATTGCACAGATTCTGGCTGGGTTGATATTAGGACCAATGTCACATATACCATATATAAGAAAAACGTTCTTCCCACCAAGTTCAATAAACTACTACGAAATTGTGGGCTTCTTCTGTCGCATACATTTCATGTTCTTATTCGGTTTAGAGACAAACCTTCAATACATGTTGCGCAATCTACGTTTGGTTACATTGGTAGCATGTGGTGGTTCCCTACTTGGTGCAATTTTTGGTCTATCAGTCTCATTTTATTTGTATCAAAATCTAAATTTGAATCTCAACATTTATTATTTCTGCATGGTCATCATGTTAATGGTATCATACACAAGCTCCCCGATGGTGATCCGTTTATCGACCGAGTTACGTTTTGCAGCGTCTAATATCGGGCGAATCGTAGTGTCCTCAGCGTTGATAATCGAAATTGCCTGCTTGGTGTTCTTTGATGTGGTGATTTGTTGGCAAAAAAGAAACCACATTTCCAATGGTTTTCTGTGTACTATCACTATATCTTTTGTGATTCTGACTAACAAATACTTAGCCGTATGGCTAAACTCGAGAAACCGATACCAAAAATACCTAAAAGCTCCTGAGTTATTACTCATACTTTTTCTTCTTCTAACAAGCTCAATGCTTATAGAAATTTTGGGTTACAATAGTATTATTAGTTGTTTTATAATTGGATTGGTGTTTCCTAAAGAAGGAAAAACAGCTAGGACATTGATATATAAACTTGGTTATTCAATTTACAATTTTGTTCTTCCTATATATTTTGGGTATATGGGATTACAATGTGACCTCATACAAGTGTTCCGAAGCCTGAATAAAACAACAGATACAGCAATATTGATTTTGTTGTGCATTGGTAGCAAACTTGGTGGCACACTTTTGGTTTGTCGATACCTTAATATTCCTACAAGTGACGGGATTTTCATTGGCTTCATATTAAATACCAGAGGTTATGCTGATTTGTTGTTCATTGCTGCTATAGCAAAACATGCAGATCTTGACTTAGATGCTTACAATATGTTGATAGTATCGATAGTATTGAACACGGTCATATCAGGATTAGTTGTGGCTTTTCTAGCAAAAGGGGAAGCGAAAATGTTTTCGAACAACCATACTACAATTGAGCCTCAACAAATGGAAGACGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGACAGGTATCTGCCGTACTCGCCACAATACTAGCAATCCATGGCTCAAGAGCATCACCTTCCACGACTTATTTAATGCATTTGATAGAGCTTGTGAAGAAAATCAAGTCCAATTTGTTATACCATGAAAAAGAAAACGGAAGCCTCAGCGATGACGAAGAAGCCTACGGTGGAAATGATGTGGTGGACATTAATAATGCCTTAGATGCATTCACTTTAGATACAAAGATTTTGATTCACCAAAAAAAGACGGTATCTTCTTTCCCAAGTATGTATGAAGATGTTTGCAATGAAGCGGAAGATCTTAAAGTGACAATAATTCTTATCCCTTTTCACAAACACGAGCGCATTGATGGAAAACTCGAAAGCGGTAAAGAAAGTATAGTAGTTACTAATCAGAAGATTCTCAGGCACGCGCCTTGTTCCGTCGGTGTGATCATTGAAAGAGGACTTACAAAGACATTTGGTTTCTCTGAGCTAATTGAATCCGAAGCCACGCAAAATGTTGCAACACTTTTCTTTGGAGGTCCAGATGACCGCGAGGCGATTGCTTGGAGCCTAAGAATCTCCAAATGCCCTCATATCAACTTAACTATTATTAGATTTTTGCCGGCTTCATCACAAAATGAAAAAATTAAAGAAAACGGAGTACAATACGACGGAAAGGAAATTCTAATGTCCTTGTCGGGGGAAGAGAGTGAGAACGACGAGATTGACAATACGTTTATGGTCGATTTCTATAACCGACATGTGACCTTAGGACAAATTGGATATGTGGAGAATTTTGTGAAGGATGGAAAGCAAACATTGGAATGTTTGAAGGAGGTTGGAGACATGTACTCTTTGTTTGTGGTTGGAAAAGGTGGTAGAAGAAATAATTCATTGACAATAGGTATGAGTGATTGGGAGGAATGTCCTGAACTTGGAACAGTTGGTGATGTGTTGGCTTCTTCAGATTTTGATATTCATGGATCTGTTTTGGTCATTCAACAACATAGAGATGCTAAGAAAGGTTTAATACATTATTAG	2349	0.378	MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHFFNVLLRSLGQPGPIAQILAGLILGPMSHIPYIRKTFFPPSSINYYEIVGFFCRIHFMFLFGLETNLQYMLRNLRLVTLVACGGSLLGAIFGLSVSFYLYQNLNLNLNIYYFCMVIMLMVSYTSSPMVIRLSTELRFAASNIGRIVVSSALIIEIACLVFFDVVICWQKRNHISNGFLCTITISFVILTNKYLAVWLNSRNRYQKYLKAPELLLILFLLLTSSMLIEILGYNSIISCFIIGLVFPKEGKTARTLIYKLGYSIYNFVLPIYFGYMGLQCDLIQVFRSLNKTTDTAILILLCIGSKLGGTLLVCRYLNIPTSDGIFIGFILNTRGYADLLFIAAIAKHADLDLDAYNMLIVSIVLNTVISGLVVAFLAKGEAKMFSNNHTTIEPQQMEDELRILACVYDPRQVSAVLATILAIHGSRASPSTTYLMHLIELVKKIKSNLLYHEKENGSLSDDEEAYGGNDVVDINNALDAFTLDTKILIHQKKTVSSFPSMYEDVCNEAEDLKVTIILIPFHKHERIDGKLESGKESIVVTNQKILRHAPCSVGVIIERGLTKTFGFSELIESEATQNVATLFFGGPDDREAIAWSLRISKCPHINLTIIRFLPASSQNEKIKENGVQYDGKEILMSLSGEESENDEIDNTFMVDFYNRHVTLGQIGYVENFVKDGKQTLECLKEVGDMYSLFVVGKGGRRNNSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLIHY	782

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi717g00006	782	Pfam	Sodium/hydrogen exchanger family	27	409	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Vivi717g00006	782	Gene3D	-	19	415	IPR038770	-
	Vivi717g00006	782	PANTHER	CATION/H + ANTIPORTER	10	773	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi717g00006	7	775	Antiporter Super Family	AT1G16380	38.520	0.0	569

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi717g00006	K26731		-	gmx:100804522	1209.9