Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi715g00003 ATGATGAGAAAAATCATGGCAGAACTTGTTGCTGGAGCATTCCTTTCGTCTTTCTTTCAAGTGATTTTTGATAGGTTGGCTTCAAGTAATTTCACTGACTATTTCCGTAGAGGCAAGCTTGACAAGTTGGTGGAGGAACTTGAGTCTACACTCGAGTCTATCAACCAAGTGTTGGATGATGCAGAGATTAAACAATACCAAATACCAAATGTCAAGAAGTGGCTTGGTGATGTTAAACATGCTATGTATGAGGCTGACCAACTCTTGGATGAGATTGCCACTGATGCACCATTGAAGAAGATAAGAGCTGAATCTCAACCTACTACCAGTAGGAATAACTATTTTGGTTATGTTTCAAGTTTTATTAATCCATTTGAATCTCGAGTCAAAGAATTGCTAAAGAATCTAAAGCATCTTGCTGAGCAAAAAGATGTGCTGGAATTGAAAAATGGATCTTTGGCTCGAAATGAAGTTGGAGTTAGTTCAAAACCTTTAGAAAGACCGCAAACTTCCTATTTGGTGGATGCATCGCAGATATATGGTAGAGATGATGAGAAAGATGAAATGATCAAATTTTTACTTTCAAACAATGGCAGTGACAACCAAACACCTGTATCTAGCATAGTTGGTCTGGGTGGGATGGGTAAGACCACCTTTGCTAAGCTTGTGTACAATGACAGTAGGATTGAGAATCATTTTGAACTTAAAGCATGGGTTTATGTTTCTGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCAAGTCATTTCATTCTCCAGCTGATGATGAGTCTATTCTCAATTTACTTCAACAGAGACTACAACGCGTACTAACGGGCAAAAAATACTTGCTTGTTTTAGATGATATATGGAACGGGAATGCGGATTGTTGGGAGCAGTTACTACTTCCTTTTAATCATGGATCTTTTGGAAGTAAGATTATTGCGACAACACGTGACAAGGATGTAGCACATGTTCTGAATTCCACAAAGATATTTGAATTACAGCAATTGGAAAAAAAAGATTGTTGGAGTTTATTTGTGACACATGCGTTTCATGGCAAAAATGTGTGCGATAATCCAAACCTTGAATTAATTGGCAAAAAAATATTGGAAAAGTGTGGAGGATTGCCATTAGCTGTAAAAACAATGGGCCAACTCTTGCGAAAAAAATTCTCTCAGCATGAATGGATGAAGATATTGGAGACTGATTTGTGGCGTTTATCTGAAGGGGACAACAACATTAACCCAGTGCTGAGATTGAGTTACCATAATCTACCTTCCAATCAGAAACGTTGTTTTGCTTATTGTTCTATATTTCCTAAAGGTTATTGGTTTTATAAAGGCGATTTAATCAGGATTTGGATGGCAGAAGGTTTGCTTAAGTGTTGCAGAACAGAAAAAAGTGAAGAAGAGTTGGGTAATGAAATTTTTGGTGATCTAGAGTCAATTTCATTTTTCCAATCAACCCCCTATAGATACTTTGACATGTATGACCTTTATGGTTTAGCTCAATCTTACTTTAACATGCATGACCTTATCAATGATTTAGCTATATCAGTGTCAGGAGAATTTTGTATGCGGATGGATGAAGCTAAGGTGGAAAGTATCTCTGAAAGGACACGTCACATTAGATGGTCTCTTCAATCAAATTTTGTTGACAAATTACTAGAGCCAATTTGTGAGCTTAAGGGCCTACGTAGTCTTTTATTAAAAGGCCACTTTGGTATATTGATAAGCAGCAATGTGCAACGTGATATGTTTTCAAGACTAAAATATTTGCGAATGTTATCATTATACTTTTGCGGCATCTCAGAGCTAGTTGATGAGATAAGCAATTTAAAGCTTCTGCGTTATCTAGATCTTTCTCATAATAGAATTTCAAGGTTACCTGACAGCATTTGTATGCTATATAATTTGCAAACACTCTTGTTGGATGGCTGTTCTAAATTGACTGAGCTCCCTTCAAATTTTTCCAAACTCATCAATTTACGTCATCTTGAACTTCCCTATTCTGTAAAGAAGACACCAAAGAATATAGGAAGCCTAATCAATCTCCAGAACTTGGCTTATTTTATAGTGGAAGAGCAGAACGGATCAGATCTTAAGGAATTGGAGAAACTAAACCATCTTCGTGGAAAAGTTCATATTCAAGGGTTGGGTAAAGTCATTGATCATACAGATGTTACAACAAGAAGTTTGAAAGATAAGAAGTATTTGGAAGAAATAGAGATGACATTTGATGGCGGAAGAGAAGATGTGGATGGATCAATAGTTGAAAGCAATGTATCTGTATTGGAGGCTCTTCAACCAAATAGTAACTTGAAGATACTCTTCATCAGCAAGTACAGAGGTAATAGCTTTCCTAATTGGGTAAGTGGTTGTCATTTACCCAACTTAGTATCTCTTACACTTGAGAGCATGAACAATTTGGAGGAATGGTTATGTATTGAAGGATTTCCTTTACTTACAGAGCTTTCTATAACAAATTGTCCCAAATTGAAAAGGGTATCACTGCCTCAACACCTTCCTTCATTACAGAAATTGGAGATTAGTGGTTGCAAATTGCTGGCCGTATCAATTCCCATTTGTGATAATATCATTTGGTTAAAAATAAAGAGATGTGGTCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAATGGTGCAGCCTTCTTAAAAATCAGTACATCGAGTTCCCCATGGTTCAATTAATCAACAATCCCAATCTGAAATTTTTAAAGTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTGGATTTGTGTTGTTATAATTCTCTTTGGGAATTTTCAATAACAGGATGGAAGTCCTCCTCCTTGCCTTTTTCACCACACTTGTTCACCCTTCTTAATGCTCTAGGGCTGTCTAATTGTCCAGAATTAGAATGTTTTCCTATGGGAGGTTTCCCTTCCAACTTGATCGATCTTAAAATAGTTAATTGTCCTAAATTGAAAGCTTCGAGAGAGGACTGGGGTTGTCTCCACCACAAATCTAAAGTTTATATTATTATTCACAGTTGCCCTAGTCTTGAGCACTTGCCAGAGGAGTGGGGTTCCATTTTTGATTTGGAGATTGAAGATTGTCCATTACTTAAGGAGAAGTACCAAAAGGAGGGAGGAGAACGTTGGCATACAATTAGTCACATCCATGAAGTGAGGATTGACGGTTTTGAGCAGCCTTCTTTTATTTCGGAAGAGGAAATGAGTGACAATGACGAGTCTATGTAA 3255 0.3705 MMRKIMAELVAGAFLSSFFQVIFDRLASSNFTDYFRRGKLDKLVEELESTLESINQVLDDAEIKQYQIPNVKKWLGDVKHAMYEADQLLDEIATDAPLKKIRAESQPTTSRNNYFGYVSSFINPFESRVKELLKNLKHLAEQKDVLELKNGSLARNEVGVSSKPLERPQTSYLVDASQIYGRDDEKDEMIKFLLSNNGSDNQTPVSSIVGLGGMGKTTFAKLVYNDSRIENHFELKAWVYVSESFDVVGLTKAILKSFHSPADDESILNLLQQRLQRVLTGKKYLLVLDDIWNGNADCWEQLLLPFNHGSFGSKIIATTRDKDVAHVLNSTKIFELQQLEKKDCWSLFVTHAFHGKNVCDNPNLELIGKKILEKCGGLPLAVKTMGQLLRKKFSQHEWMKILETDLWRLSEGDNNINPVLRLSYHNLPSNQKRCFAYCSIFPKGYWFYKGDLIRIWMAEGLLKCCRTEKSEEELGNEIFGDLESISFFQSTPYRYFDMYDLYGLAQSYFNMHDLINDLAISVSGEFCMRMDEAKVESISERTRHIRWSLQSNFVDKLLEPICELKGLRSLLLKGHFGILISSNVQRDMFSRLKYLRMLSLYFCGISELVDEISNLKLLRYLDLSHNRISRLPDSICMLYNLQTLLLDGCSKLTELPSNFSKLINLRHLELPYSVKKTPKNIGSLINLQNLAYFIVEEQNGSDLKELEKLNHLRGKVHIQGLGKVIDHTDVTTRSLKDKKYLEEIEMTFDGGREDVDGSIVESNVSVLEALQPNSNLKILFISKYRGNSFPNWVSGCHLPNLVSLTLESMNNLEEWLCIEGFPLLTELSITNCPKLKRVSLPQHLPSLQKLEISGCKLLAVSIPICDNIIWLKIKRCGRILINELSSSLKWCSLLKNQYIEFPMVQLINNPNLKFLKLDFKDFVECPSLDLCCYNSLWEFSITGWKSSSLPFSPHLFTLLNALGLSNCPELECFPMGGFPSNLIDLKIVNCPKLKASREDWGCLHHKSKVYIIIHSCPSLEHLPEEWGSIFDLEIEDCPLLKEKYQKEGGERWHTISHIHEVRIDGFEQPSFISEEEMSDNDESM 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi715g00003 1084 SUPERFAMILY L domain-like 771 1026 - -
Vivi715g00003 1084 Coils Coil 129 149 - -
Vivi715g00003 1084 Gene3D - 338 423 IPR042197 -
Vivi715g00003 1084 Gene3D Ribonuclease Inhibitor 535 881 IPR032675 -
Vivi715g00003 1084 Gene3D Ribonuclease Inhibitor 882 1064 IPR032675 -
Vivi715g00003 1084 Pfam Rx N-terminal domain 14 101 IPR041118 -
Vivi715g00003 1084 Gene3D - 166 334 IPR027417 -
Vivi715g00003 1084 ProSiteProfiles Leucine-rich repeat profile. 617 638 IPR001611 GO:0005515
Vivi715g00003 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 438 IPR027417 -
Vivi715g00003 1084 PRINTS Disease resistance protein signature 375 389 - -
Vivi715g00003 1084 PRINTS Disease resistance protein signature 205 220 - -
Vivi715g00003 1084 PRINTS Disease resistance protein signature 278 292 - -
Vivi715g00003 1084 PRINTS Disease resistance protein signature 842 858 - -
Vivi715g00003 1084 Gene3D - 424 521 IPR036388 -
Vivi715g00003 1084 FunFam Probable disease resistance protein At1g61300 162 332 - -
Vivi715g00003 1084 Gene3D - 19 144 - -
Vivi715g00003 1084 PANTHER DISEASE RESISTANCE PROTEIN RP 44 990 IPR044974 GO:0006952
Vivi715g00003 1084 Pfam NB-ARC domain 183 424 IPR002182 GO:0043531
Vivi715g00003 1084 Coils Coil 40 64 - -
Vivi715g00003 1084 SUPERFAMILY L domain-like 511 863 - -
Vivi715g00003 1084 SMART LRR_typ_2 615 638 IPR003591 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi715g00003 208 444 WRKY Transcription Factor Family AT5G45050 27.160 1.27e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi715g00003 - - vvo:131659801 1256.89