Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi715g00001 ATGGCAGAACTTGTTGCTGGAGCATTCCTTTCGTCTTTCTTTCAAGTGATTTTTGATAGGTTGGCTTCAAGTAATTTCACTGACTATTTCCGTAGAGGCAAGCTTGACAAGTTGGTGGAGGAACTTGAGTCTACACTCGAGTCTATCAACCAAGTGTTGGATGATGCAGAGATTAAACAATACCAAATACCAAATGTCAAGAAGTGGCTTGGTGATGTTAAACATGCTATGTATGAGGCTGACCAACTCTTGGATGAGATTGCCACTGATGCACCATTGAAGAAGATAAGAGCTGAATCTCAACCTACTACCAGTAGGAATAACTATTTTGGTTATGTTTCAAGTTTTATTAATCCATTTGAATCTCGAGTCAAAGAATTGCTAAAGAATCTAAAGCATCTTGCTGAGCAAAAAGATGTGCTGGAATTGAAAAATGGATCTTTGGCTCGAAATGAAGTTGGAGTTAGTTCAAAACCTTTAGAAAGACCGCAAACTTCCTATTTGGTGGATGCATCGCAGATATATGGTAGAGATGATGAGAAAGATGAAATGATCAAATTTTTACTTTCAAACAATGGCAGTGACAACCAAACACCTGTATCTAGCATAGTTGGTCTGGGTGGGATGGGTAAGACCACCTTTGCTAAGCTTGTGTACAATGACAGTAGGATTGAGAATCATTTTGAACTTAAAGCATGGGTTTATGTTTCTGAATCTTTTGATGTTGTTGGACTCACCAAAGCAATTCTCAAGTCATTTCATTCTCCAGCTGATGATGAGTCTATTCTCAATTTACTTCAACAGAGACTACAACGCGTACTAACGGGCAAAAAATACTTGCTTGTTTTAGATGATATATGGAACGGGAATGCGGATTGTTGGGAGCAGTTACTACTTCCTTTTAATCATGGATCTTTTGGAAGTAAGATTATTGCGACAACACGTGACAAGGATGTAGCACATGTTCTGAATTCCACAAAGATATTTGAATTACAGCAATTGGAAAAAAAAGATTGTTGGAGTTTATTTGTGACACATGCGTTTCATGGCAAAAATGTGTGCGATAATCCAAACCTTGAATTAATTGGCAAAAAAATATTGGAAAAGTGTGGAGGATTGCCATTAGCTGTAAAAACAATGGGCCAACTCTTGCGAAAAAAATTCTCTCAGCATGAATGGATGAAGATATTGGAGACTGATTTGTGGCGTTTATCTGAAGGGGACAACAACATTAACCCAGTGCTGAGATTGAGTTACCATAATCTACCTTCCAATCAGAAACGTTGTTTTGCTTATTGTTCTATATTTCCTAAAGGTTATTGGTTTTATAAAGGCGATTTAATCAGGATTTGGATGGCAGAAGGTTTGCTTAAGTGTTGCAGAACAGAAAAAAGTGAAGAAGAGTTGGGTAATGAAATTTTTGGTGATCTAGAGTCAATTTCATTTTTCCAATCAACCCCCTATAGATACTTTGACATGTATGACCTTTATGGTTTAGCTCAATCTTACTTTAACATGCATGACCTTATCAATGATTTAGCTATATCAGTGTCAGGAGAATTTTGTATGCGGATGGATGAAGCTAAGGTGGAAAGTATCTCTGAAAGGACACGTCACATTAGATGGTCTCTTCAATCAAATTTTGTTGACAAATTACTAGAGCCAATTTGTGAGCTTAAGGGCCTACGTAGTCTTTTATTAAAAGGCCACTTTGGTATATTGATAAGCAGCAATGTGCAACGTGATATGTTTTCAAGACTAAAATATTTGCGAATGTTATCATTATACTTTTGCGGCATCTCAGAGCTAGTTGATGAGATAAGCAATTTAAAGCTTCTGCGTTATCTAGATCTTTCTCATAATAGAATTTCAAGGTTACCTGACAGCATTTGTATGCTATATAATTTGCAAACACTCTTGTTGGATGGCTGTTCTAAATTGACTGAGCTCCCTTCAAATTTTTCCAAACTCATCAATTTACGTCATCTTGAACTTCCCTATTCTGTAAAGAAGACACCAAAGAATATAGGAAGCCTAATCAATCTCCAGAACTTGGCTTATTTTATAGTGGAAGAGCAGAACGGATCAGATCTTAAGGAATTGGAGAAACTAAACCATCTTCGTGGAAAAGTTCATATTCAAGGGTTGGGTAAAGTCATTGATCATACAGATGTTACAACAAGAAGTTTGAAAGATAAGAAGTATTTGGAAGAAATAGAGATGACATTTGATGGCGGAAGAGAAGATGTGGATGGATCAATAGTTGAAAGCAATGTATCTGTATTGGAGGCTCTTCAACCAAATAGTAACTTGAAGATACTCTTCATCAGCAAGTACAGAGGTAATAGCTTTCCTAATTGGGTAAGTGGTTGTCATTTACCCAACTTAGTATCTCTTACACTTGAGAGCATGAACAATTTGGAGGAATGGTTATGTATTGAAGGATTTCCTTTACTTACAGAGCTTTCTATAACAAATTGTCCCAAATTGAAAAGGGTATCACTGCCTCAACACCTTCCTTCATTACAGAAATTGGAGATTAGTGGTTGCAAATTGCTGGCCGTATCAATTCCCATTTGTGATAATATCATTTGGTTAAAAATAAAGAGATGTGGTCGGATTTTGATAAATGAGTTGTCATCCAGCTTGAAATGGTGCAGCCTTCTTAAAAATCAGTACATCGAGTTCCCCATGGTTCAATTAATCAACAATCCCAATCTGAAATTTTTAAAGTTGGATTTCAAGGACTTTGTAGAATGTCCCTCTTTGGATTTGTGTTGTTATAATTCTCTTTGGGAATTTTCAATAACAGGATGGAAGTCCTCCTCCTTGCCTTTTTCACCACACTTGTTCACCCTTCTTAATGCTCTAGGGCTGTCTAATTGTCCAGAATTAGAATGTTTTCCTATGGGAGGTTTCCCTTCCAACTTGATCGATCTTAAAATAGTTAATTGTCCTAAATTGAAAGCTTCGAGAGAGGACTGGGGTTGTCTCCACCACAAATCTAAAGTTTATATTATTATTCACAGTTGCCCTAGTCTTGAGCACTTGCCAGAGGAGTGGGGTTCCATTTTTGATTTGGAGATTGAAGATTGTCCATTACTTAAGGAGAAGTACCAAAAGGAGGGAGGAGAACGTTGGCATACAATTAGTCACATCCATGAAGTGAGGATTGACGGTTTTGAGCAGCCTTCTTTTATTTCGGAAGAGGAAATGAGTGACAATGACGAGTCTATGTAA 3240 0.371 MAELVAGAFLSSFFQVIFDRLASSNFTDYFRRGKLDKLVEELESTLESINQVLDDAEIKQYQIPNVKKWLGDVKHAMYEADQLLDEIATDAPLKKIRAESQPTTSRNNYFGYVSSFINPFESRVKELLKNLKHLAEQKDVLELKNGSLARNEVGVSSKPLERPQTSYLVDASQIYGRDDEKDEMIKFLLSNNGSDNQTPVSSIVGLGGMGKTTFAKLVYNDSRIENHFELKAWVYVSESFDVVGLTKAILKSFHSPADDESILNLLQQRLQRVLTGKKYLLVLDDIWNGNADCWEQLLLPFNHGSFGSKIIATTRDKDVAHVLNSTKIFELQQLEKKDCWSLFVTHAFHGKNVCDNPNLELIGKKILEKCGGLPLAVKTMGQLLRKKFSQHEWMKILETDLWRLSEGDNNINPVLRLSYHNLPSNQKRCFAYCSIFPKGYWFYKGDLIRIWMAEGLLKCCRTEKSEEELGNEIFGDLESISFFQSTPYRYFDMYDLYGLAQSYFNMHDLINDLAISVSGEFCMRMDEAKVESISERTRHIRWSLQSNFVDKLLEPICELKGLRSLLLKGHFGILISSNVQRDMFSRLKYLRMLSLYFCGISELVDEISNLKLLRYLDLSHNRISRLPDSICMLYNLQTLLLDGCSKLTELPSNFSKLINLRHLELPYSVKKTPKNIGSLINLQNLAYFIVEEQNGSDLKELEKLNHLRGKVHIQGLGKVIDHTDVTTRSLKDKKYLEEIEMTFDGGREDVDGSIVESNVSVLEALQPNSNLKILFISKYRGNSFPNWVSGCHLPNLVSLTLESMNNLEEWLCIEGFPLLTELSITNCPKLKRVSLPQHLPSLQKLEISGCKLLAVSIPICDNIIWLKIKRCGRILINELSSSLKWCSLLKNQYIEFPMVQLINNPNLKFLKLDFKDFVECPSLDLCCYNSLWEFSITGWKSSSLPFSPHLFTLLNALGLSNCPELECFPMGGFPSNLIDLKIVNCPKLKASREDWGCLHHKSKVYIIIHSCPSLEHLPEEWGSIFDLEIEDCPLLKEKYQKEGGERWHTISHIHEVRIDGFEQPSFISEEEMSDNDESM 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi715g00001 1079 SUPERFAMILY L domain-like 767 1021 - -
Vivi715g00001 1079 Coils Coil 35 59 - -
Vivi715g00001 1079 Gene3D - 161 329 IPR027417 -
Vivi715g00001 1079 PRINTS Disease resistance protein signature 370 384 - -
Vivi715g00001 1079 PRINTS Disease resistance protein signature 273 287 - -
Vivi715g00001 1079 PRINTS Disease resistance protein signature 200 215 - -
Vivi715g00001 1079 PRINTS Disease resistance protein signature 837 853 - -
Vivi715g00001 1079 Gene3D - 333 418 IPR042197 -
Vivi715g00001 1079 PANTHER DISEASE RESISTANCE PROTEIN RP 39 985 IPR044974 GO:0006952
Vivi715g00001 1079 Coils Coil 124 144 - -
Vivi715g00001 1079 Gene3D Ribonuclease Inhibitor 530 876 IPR032675 -
Vivi715g00001 1079 Gene3D Ribonuclease Inhibitor 877 1059 IPR032675 -
Vivi715g00001 1079 Gene3D - 14 139 - -
Vivi715g00001 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 433 IPR027417 -
Vivi715g00001 1079 Gene3D - 419 516 IPR036388 -
Vivi715g00001 1079 SMART LRR_typ_2 610 633 IPR003591 -
Vivi715g00001 1079 ProSiteProfiles Leucine-rich repeat profile. 612 633 IPR001611 GO:0005515
Vivi715g00001 1079 FunFam Probable disease resistance protein At1g61300 157 327 - -
Vivi715g00001 1079 SUPERFAMILY L domain-like 506 858 - -
Vivi715g00001 1079 Pfam Rx N-terminal domain 9 96 IPR041118 -
Vivi715g00001 1079 Pfam NB-ARC domain 178 419 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi715g00001 203 439 WRKY Transcription Factor Family AT5G45050 27.160 1.38e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi715g00001 - - vvo:131659801 1256.89