Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi710g00003 ATGGATAAGCTAGAGGGGAAGGCAGTTGCCATGAGCAAAAAATACATTGATAGGAGTTTATTCGAGCATGAGTCAACTTATACTAATGCGTATGAGTTATGGATCAAACTTGAATCCCTGATTCAAAAGAAGACGCCGAGAAACAAAGCCCACCTTATCAGACAACTGGTGAAATTTGAGTACTCAAACGGCCAAAACATGATCAAGCATTTGAATACCTCCAATGGTATTGTGAATCAACTAACGAAATCTTACATGAAGAAAGATGATGAGTTGCAAACTCTTATAATCCTAAGTTATCTACCTGAGAGTTGGGACACCCTATTTATCAATCTTAATAACTCTACTTCATATGGAAAACTTGTCAGGGATTCTGTTACAGATTCCTTTCTAAATAAAGAGTCAAAATGGAGGGAAAGAGGCTTCAACAACCAGTTTGAAGCCACAAATGTTGATAACAGAGGAAGAACACCAACACCAACACTAACACCCTCTGCCATAGCTGCACCAGCTCCTGTTCCAGTTGTTTTTACTGCACCAACACCAACCCCATCTAGTGCTGCTTCACCAACACCTACTTTATTTCCAGCTTCTGGTGGTCACTCTAATTGGAAAAAGAAAGTCATTATAGGTCTTTGTGCAGCAATGGCATTTTTGTTGTTGTGTATCATGGTTTGTTATTTCAGAGGAAATTCATTAATACAACAGATAAAATATCAGTTTGGGAAAAAGAATGATAAAGATATAGAAGCATTTTTAAAAGATCATGGAGCACTATTGCAGAAAAGGTATAAATTTTCAGACATAAAGAAAATTACAAACTCTTTCAAGGTTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTACAAAGGAAAATTATTCAATGGATGTCTTGTTGCAGTGAAAATATTGAATGCGTCCAAAGAAAATGGTGAAGATTTTATCAATGAGGTTGCTAGTATTACTAGAACTTCACATGTTAATATTGTCACTCTTCTAGGATTTTGTGTTGAACGCAACAAAAAAGCTCTCATATATGAATTCATGCCCAACGGTTCTCTTGACAAATTTATTTACAATAAGGGACCTGAAACTATTGCATCTTTAAGCTGGAATGATTTGTATCAAATTTCGAAAGGGATAGCCCGTGGACTAGAATACTTGCATAGAGGATGTACCACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTAGATGAAAACTTTTGTCCGAAGATTTCAGATTTTGGACTAGCAAAACTCTGTCTTAGAAAAGAGAGCATTATTTCGATGTCAAATCAAAGAGGAACAATGGGATATGTAGCTCCGGAAGTGTGGAATAGGCATTTTGGAGGAGTTTCACACAAGTCTGATGTGTATAGTTATGGAATGATGTTGTTGGAAATGGTCGGAGGGAGGAAAAATGTTAATGCTGATGCAAGTAACACAAGTGAGATATACTTTCCTCATTGGGTATACAGTAGACTTGAGCTTGGTAGTGATTTGAGACCTGATGGGGTAATGGATACTGAAGAAGATGAGATTGCAAGAAGAATGACCATTGTAGGTTTGTGGTGCATTCAAACATTTCCTAGTGATAGACCTACAATGAGTAAAGTGATTGAAATGTTAGAAGTTAACATGAGTTCATTGGAAATACCACCAAAACCATTGCTTTCTTCTCCTACTAGATCAATATCAAAGTCTTCTTCGTCTTAA 1728 0.3652 MDKLEGKAVAMSKKYIDRSLFEHESTYTNAYELWIKLESLIQKKTPRNKAHLIRQLVKFEYSNGQNMIKHLNTSNGIVNQLTKSYMKKDDELQTLIILSYLPESWDTLFINLNNSTSYGKLVRDSVTDSFLNKESKWRERGFNNQFEATNVDNRGRTPTPTLTPSAIAAPAPVPVVFTAPTPTPSSAASPTPTLFPASGGHSNWKKKVIIGLCAAMAFLLLCIMVCYFRGNSLIQQIKYQFGKKNDKDIEAFLKDHGALLQKRYKFSDIKKITNSFKVKLGQGGFGVVYKGKLFNGCLVAVKILNASKENGEDFINEVASITRTSHVNIVTLLGFCVERNKKALIYEFMPNGSLDKFIYNKGPETIASLSWNDLYQISKGIARGLEYLHRGCTTRILHFDIKPHNILLDENFCPKISDFGLAKLCLRKESIISMSNQRGTMGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNVNADASNTSEIYFPHWVYSRLELGSDLRPDGVMDTEEDEIARRMTIVGLWCIQTFPSDRPTMSKVIEMLEVNMSSLEIPPKPLLSSPTRSISKSSSS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi710g00003 575 Gene3D Phosphorylase Kinase; domain 1 236 348 - -
Vivi710g00003 575 FunFam serine/threonine-protein kinase PBS1-like 243 348 - -
Vivi710g00003 575 Pfam Protein kinase domain 277 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi710g00003 575 SUPERFAMILY Protein kinase-like (PK-like) 261 549 IPR011009 -
Vivi710g00003 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Vivi710g00003 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 245 568 IPR045874 GO:0004672
Vivi710g00003 575 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Vivi710g00003 575 Pfam gag-polypeptide of LTR copia-type 4 136 - -
Vivi710g00003 575 SMART serkin_6 274 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi710g00003 575 FunFam PR5-like receptor kinase 349 559 - -
Vivi710g00003 575 ProSiteProfiles Protein kinase domain profile. 274 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi710g00003 575 Gene3D Transferase(Phosphotransferase) domain 1 349 556 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi710g00003 185 569 Receptor kinase-like Gene Family AT5G38280 53.077 2.63e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vivi710g00003 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi710g00003 - - mtr:25496836 629.017