Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi70g00001 ATGGATGGTGGTGACGTTATTGGCCATGGAGTAATGCAAGTTAACTCTGAAGCACACGATGGGATTTTTCATGAGAATGGTCGTGTTAACGATGACGGTGAACTGGATTTTGTTAGTGATGGATGCTTGGATAATGTTGAATATGACAACAGAGTTGTTGGTGAAGATTCTGAGTTTGAAGAAGTTGAATACTATGATGAAGATGCGGAAGAAGATAATGAATTTTACGGATGTGAATACGATGATGAAGATGGAGATGATGATGGCGAATTAGATGGTGATGATTATGATGACGAGATAGGTTCCGGTTATGTTAGTGGACACGAATATTGGAATACAGATTCAAACGGCGGTGGAATTTCTGGGGAAGGATCGGAATGGGGTTCGGACAGATTGAATGAATCGATATCTTCAGATCAACTTCCAGACGAATCATTTGTTGTTGACGAGTTTGACGATATTGCAAATATGGACATGTTTAACTTGCAATGTGATGATGTTTCGAAGCTGCAATTTGGAAGTCTGGAAATAGCTTACACATGGTACTGTTGGTTTGCAAAGATGAACGGTTTTGCAGTCCGTAAAGGTCAAGTTATTAAAAAAAAGAGTGGAGATGTTACTCAACAAACATTTCTTTGTAACCTTGCAGGATTTAGGCAAAACAAAGTAGATAATCGCAAACGTGGTCCGAGGCACGAAACCCGGTGTGGATGTGAAGCAAAATTTCGGGTTCATATTGATATAATTTCACACCGTTGGTATGTCACAGTTTTTACCTTTGAGCACAATCATGCAATGTTAAAGGAGAAGCACTGCAGGCTGTTGGCAGGTAATAGGAAGCTTAGTAAGTCAGATAAGATGCAAATTAAGAATTTTGGGAATGTCGGAATCAAAGTAACTCAAATGATTGGTTCATTCGCTAATGCTGCCGGGGGGTGTGATAAGGTAGGATTTTTGAAGAAGGATGTACATAATCAAATTGCAAGACAAAGGAAAGAGATGTCTTCTGATGCTAAAGGTGCTGTCAGGTATCTTATTGATCTTCGTGTAATAGATCCATTGATGCTTGTTGCACACACGGTGGGTGCGGATGGAACGTTGCAAAACCTATTTTGGAGCGACGGTGAGAGTCAAAAGAATTATGAACTGTTTGGTGATGTGCTTGCTTTTGATGCTACCTACAAGAAAAATAAGTACAGGTGCCCATTTGTTGTTTTTTCTGGTGTTAATCACCATAACCAGACGATTATATTTGCTACTGCCATAGTTTCAAATGAGGTTGAAGGGACATATGTATGGTTGCTGGAGCAGTTTTTGGTTGCAATGAAAGGTAAGACACCTTTATCTGTAATAACAGACGGTGATGTTGCTATGAGAAATGCAATCAGGAAAGTCTTTCCCAACAGTTACCACAGGTTATGTGCATGGCATCTCCTACGAAATGCAATTTCCAACATTAGCAATCCCAATTTCATCCCTGTTTTCAAAAAATTAATGCTTGGTGATCACGATGTTTGGAAATTTGAGAGTCTGTGGAATGAAATGTTAGATAGGTTTGGGTTAGAAGATAATAATTGGATCAATGAATTGTACCAGAAAAGGAAGATGTGGGCAACAGCTCATATTAGGGGAAATTTCTTTGCAGGAATAAGAACGACATCGCGGTGCGAAGCATTTCATAGTCATATGGGACAGTTTGTACACTCGAGGATGAATATGACTGATTTTGTTAAGCAGTTCCATAGGTGTGTGGCATATTTTCGATTTAGAGAGGTTCAAGCTGATTTTGAATCCCAATATGGACAGGCAGTGTTGCATACCAATCTTAGGGCGCTTGAGAGGTCAGCATCAAAGCACTGGACAAAAGAGATATTTGAAATGGTACGATCTGTTATGAAAAAGGTAACCTTAACATCTGTATTAGATATTCAAGATATGGCATCAGTTACCATTTATGCGGTGACAAAATACAGAGACGAAGGGCATGGATGGCGTGTTTCCCACTGTCCATCGAATAACGATTTCAGATGCTCGTGTCTTAGAATGGAATCCATTGGGATTCCTTGTGAGCACATTGTTGCTGTGATGGTTTATCTTAATATTGTAGAATTTCCTGAGAATCTTGTGTTGAATCGTTGGTCATTATATGCGAAGGAGTCTATTAGTGGAAGTTATGAAGATGGTTCCCACTACTGGGATTCACATTTGGTTGCTAGACACGCTACTTTGGTGAATCTTAGTAAGGAGGTCGCTGACTTGTCATATATGGATGTTGATGATTACAAAAAATATTTAGAATATCTGACTAATGAACTTTGTAGGCTTAAATCGAAGTACAACAATGAAGATGTTCCAGATAACATACATGTTGAAGAGGAGTTGGTGAATATACTTAACCCTTCATGTTCAAGAAGCAAGGGTTGTGGACCAGGTACTGTTGGTACATCAGAGAGACCCAGGCGGACACAGACGTGTGGGATATGCGGTGCAGCTGGTCACAACAGAAGATGCTGCCCTACTCTTGGAGCAGATGGAGAGCCTCCTGCAGATAGTTCTTTACAATCAGCATCTGTAAGGCTAAGTAATGACTATGGATTTTCAGTTTGA 2607 0.3985 MDGGDVIGHGVMQVNSEAHDGIFHENGRVNDDGELDFVSDGCLDNVEYDNRVVGEDSEFEEVEYYDEDAEEDNEFYGCEYDDEDGDDDGELDGDDYDDEIGSGYVSGHEYWNTDSNGGGISGEGSEWGSDRLNESISSDQLPDESFVVDEFDDIANMDMFNLQCDDVSKLQFGSLEIAYTWYCWFAKMNGFAVRKGQVIKKKSGDVTQQTFLCNLAGFRQNKVDNRKRGPRHETRCGCEAKFRVHIDIISHRWYVTVFTFEHNHAMLKEKHCRLLAGNRKLSKSDKMQIKNFGNVGIKVTQMIGSFANAAGGCDKVGFLKKDVHNQIARQRKEMSSDAKGAVRYLIDLRVIDPLMLVAHTVGADGTLQNLFWSDGESQKNYELFGDVLAFDATYKKNKYRCPFVVFSGVNHHNQTIIFATAIVSNEVEGTYVWLLEQFLVAMKGKTPLSVITDGDVAMRNAIRKVFPNSYHRLCAWHLLRNAISNISNPNFIPVFKKLMLGDHDVWKFESLWNEMLDRFGLEDNNWINELYQKRKMWATAHIRGNFFAGIRTTSRCEAFHSHMGQFVHSRMNMTDFVKQFHRCVAYFRFREVQADFESQYGQAVLHTNLRALERSASKHWTKEIFEMVRSVMKKVTLTSVLDIQDMASVTIYAVTKYRDEGHGWRVSHCPSNNDFRCSCLRMESIGIPCEHIVAVMVYLNIVEFPENLVLNRWSLYAKESISGSYEDGSHYWDSHLVARHATLVNLSKEVADLSYMDVDDYKKYLEYLTNELCRLKSKYNNEDVPDNIHVEEELVNILNPSCSRSKGCGPGTVGTSERPRRTQTCGICGAAGHNRRCCPTLGADGEPPADSSLQSASVRLSNDYGFSV 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi70g00001 868 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 167 756 IPR031052 GO:0006355
Vivi70g00001 868 Pfam MULE transposase domain 387 481 IPR018289 -
Vivi70g00001 868 Pfam SWIM zinc finger 676 699 IPR007527 GO:0008270
Vivi70g00001 868 ProSiteProfiles Zinc finger SWIM-type profile. 652 700 IPR007527 GO:0008270
Vivi70g00001 868 SMART 26again6 675 702 IPR006564 GO:0008270
Vivi70g00001 868 Pfam FAR1 DNA-binding domain 181 267 IPR004330 -
Vivi70g00001 868 MobiDBLite consensus disorder prediction 65 94 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi70g00001 MULE 3.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi70g00001 - - vvo:131598033 1234.94