LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi707g00023	ATGTCAATTCAATACATTCAGTGTGTTAACCACCTTCAAAGAGCAATGCATTCGTTACTCAAACTAGAGCCATTTTCGCAGAAACTCATCCATGCACAAAACCTAATGCAAATTGCCATGAAGAGACTGCAGAAAGAGTTCTACCAGATATTATCCGCGAACCAGGCTCACCTTGATCCCGAATCCGTGTCCATTGGATCCTCTGACACTTCCTTCAGTTCTTACGACGATGGAGGAGAGGAAAAAGATACTGGAACTGCAGCGGAACGTATCTCCGAAGTGGAACGTGTTTCTTGTGACATGGTTGATGATTTGAGAATTATTGCTGATTGTATGGTTTCTAATGGTTACGGAAAGGAATGTGTAAAGGTTTATACTAAAGTGAGAAAATCAATTATTGATGAAGGCATTTATAAACTGAACGTGGAGGAACGAAGCTTCTCGAAGGTGAATAAGATGGATTGGAAAATTCTTGAGATGAAAATCAAGAGTTGGTTAGAGGCGGTTAGGATTTCAGTGAGAACACTCTTCATCGGAGAGAGAAATCTCTGCGATCGGATTTTCGCTTCTAGATCCATCAGAGAAGCTTGCTTTGGTGAGATATCAAGAGATGGAGCTATTATTTTGTTCAGATTTCCTGAACTCGTCGTCACCAAATCAAAGAAATCAATGCCAGAGATGATTTTCCTTGTGCTCGACATGTACACTGCAATCACCGTGTTGTTGCCGGAGATTGAATCGATCTTCTCGTTTATATCAACCGCAGCTGTTATATCTCAAGCATACAATTCACAACAACGACTCGTGGAGTCGGTAAGGAAGATACTCTCAGAGTTCGAATACACAATGGTGAAAAACACTTCCAAATTGACGGGGAATCTCGGGGAATTTCATTCTCTGACGACTCGAACAATGCAGTACCTCACTCGTCTTGCCGATTACAACCATGTTCTCTCTGAAATTTTCTTGGATATTCACCCGCCGATGACGTCAGCATTGCCGGAATCATTTTCATACAGTCTAGAATTATCCAACAACACTACGGATATTGCGACCGGATTTTCCGTTCAAATGACGCGGCTGATTGAAGTTCTTCTTTCTGAAATCGACGGAAAATCGAATCAATGTATGGATATATCATTGTCTTATCTATTTCTCGCAAACAATCTCTGGCACGTCGTGGAAAAGGTACGTGCCACGAGTTTACAAGATGTTCTGGGGGATGATTGGTTGTTGAGGCACATATCAAAGGTGAAAAGGTTGATGGAGAACTACGAGAGAGTAGCGTGGGATGAAGTTTTTTCGTCATTGCCGGAAAATTCAACAACAATATCAGTGGCGGAGGTGAGAGGGGTGTTTATGAAATTTAGTCTGGAATTCCAGAGAGCTTATCAGAAACAGAATTCATTTGTCGTGCCAGAATCTGAATTTTGCGAAGAGATAAAAGCGTCTCTAGAGAGGAAAGTAATTCCGATTTATCGCGAGTTGTGTGATACATATGGGAGGATTATGGCAGGAAGATCCTTTACTGAAATGAATGAATATGTTGTTTTTACCCCTGAAGATGTTCAGAAATGCCTGGGGAATCTCTTCTCAGGTGGAAAAGTTTAG	1611	0.414	MSIQYIQCVNHLQRAMHSLLKLEPFSQKLIHAQNLMQIAMKRLQKEFYQILSANQAHLDPESVSIGSSDTSFSSYDDGGEEKDTGTAAERISEVERVSCDMVDDLRIIADCMVSNGYGKECVKVYTKVRKSIIDEGIYKLNVEERSFSKVNKMDWKILEMKIKSWLEAVRISVRTLFIGERNLCDRIFASRSIREACFGEISRDGAIILFRFPELVVTKSKKSMPEMIFLVLDMYTAITVLLPEIESIFSFISTAAVISQAYNSQQRLVESVRKILSEFEYTMVKNTSKLTGNLGEFHSLTTRTMQYLTRLADYNHVLSEIFLDIHPPMTSALPESFSYSLELSNNTTDIATGFSVQMTRLIEVLLSEIDGKSNQCMDISLSYLFLANNLWHVVEKVRATSLQDVLGDDWLLRHISKVKRLMENYERVAWDEVFSSLPENSTTISVAEVRGVFMKFSLEFQRAYQKQNSFVVPESEFCEEIKASLERKVIPIYRELCDTYGRIMAGRSFTEMNEYVVFTPEDVQKCLGNLFSGGKV	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi707g00023	536	Gene3D	Exocyst complex component Exo70	2	536	-	-
	Vivi707g00023	536	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	4	533	IPR004140	GO:0000145\|GO:0006887
	Vivi707g00023	536	Pfam	Exo70 exocyst complex subunit	163	527	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Vivi707g00023	536	MobiDBLite	consensus disorder prediction	62	86	-	-
	Vivi707g00023	536	SUPERFAMILY	Cullin repeat-like	4	531	IPR016159	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi707g00023	2	531	EXO70 exocyst subunit family	AT3G09520	46.111	4.30e-156	457

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi707g00023	K07195		-	gmx:100798477	597.816