Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi705g00002 ATGGAAGAGACTATTTTGGATGATGAACTTGAATCAAATATTAACCTTTCTGAAGAGCCACAAATTAATATTGTTGCAGAAGAGAATATTGAGCCTTATGTAGGAATGGAATTTGATTCATTGGAAAAAGCTACAGACTTTTACAGATTATTTTCTAAAGCAAAAGGATTTGGAATTCGTACTCGATCAAGTAAGCCAAATTATTGCATTTTAGTATGTGTTAGGGAGGGTAAACTACCGGTGAAAAGTACGAATGATAATAACGTGGAAGTGAAGAAAAAATGTTCAACCATGCGCATGGGATGTCAAGCATCACTTACTATATCAAAAGAAAATAATAGCCACATGTGGACTGTAAAATCATACGACAATAATCACAATCATGCCATGGCTAGTCCCAAAAGTGTATCTTATTTGAGGTGTCATAAAAATATGAATAGTGCTGCAAAAAATCTTATTGAGAAGTTTAGTGAAGAAGGTTTGCCTACTGGAAAGGTTGCTTCAATGTTTAAGGAAAGTGATTTAGCTTTTTCTAATAGAGACTGTTGGAATCACATGAGAAATGTTCGAACGAATAATTTGGATATCGGAGATGCACAAGCAGTTTTTAATTATTGCAAGCACAAGCAAGCTCAAAATTCTAATTTTTTCTATGCAATACAGTGTGACGATGAAGCTAGAATGGTAAAAAAAATTTGGATTGATGCCAGATCAAGGTTAGCTTATCAACATTTTGGAGACGTTGTTACCTTTGACACTACTTATAAAACCAACAAATATAGTATGCCATTTGCCCCATTTACTGGGGTAAACCACCATCTCCAATCAATTTTATTTGGCTGTGCATTATTACAAGATGAATCAGAAATATCTTTTACATGGTTATTTGAAACTTGGCTTGAAGCAATGAATGGAAAAAAACCTATATCAATAATAACTGATCAAGACTTAGCTATTGGAGCTGCAGTGACTAAGGTATTTCCACAAACCCGTCATCGTTTATGTTTGTGGCACATAAGAAAGAATTTTCCAGAAAAGCTTGCACATATATATCACAAAAAATCAAAGTTTAAGCATGAGCTAAAGAGATGCATTCGAGAATCACCAACTGTAAATGATTTTGAAGTTGATTGGCAGCAAATAATGGATACCTACAATTTACAAGAAAATGAATGGCTTCAGCGGTTGTTTGAAATTCGAGAGTCATGGATACCCGTTTATAACAGAAAAACTTTTTTTGCCGGTATGAATACTACACAAAGAAGTGAGAGCATCAATTCTTTTTTTGACTCTTTTGTTAATTCAACCACAACACTACAAGAATTTGTGGTAAAATTTGAAAAGGCAGTTAATAATCGTTATGAAGCTGAAAAGAGAGAGGACTTTGAGTCTAAACATAAATCACGCATTTTGAGTATCAAATCGAAAATAGAGGAGCATGCGGCATCGATTTATACAAGAAATATGTTTGGAAAATTTCAACATGAGCTTGCACTTGTTAGCCAATTTACAAAGCACAAGATTGAGAAAAATGGCTCACAATATAGGTATCAAATATCCAATTGTTTTAAAGATCGAGACAAATTCATCGTTGATATAAATTTAGAATCAAAGGATGCTACTTGTACTTGTCAGCTTTTTGAATTTATGGGAATATTATGCAGACACATTTTGACAATTTTTCAAACTAAAAATATACTTCAAATTCCCAATCAATATATATTGCATCGCTGGACAAAAGAAGCTAATAGATACATGGAGGTTAGTGTTATGGATTCTCATGATGATGGGGTGGATACTTTGAGAAGCATACACTTGCATCAACAATTTAGCAAATTTTCAAAATTTTCTAAACAATCAAAAGAAGCGTATGAGTTTATTATGGTAGAGTTTGAGCGTATTTGTAATACTTTGGAAACAATGGGATTAAAATTCTCCAATGTAAATGATGCTCCTATAGATTTGCAACAACAAGATGATGATACACATGATAATGTTTCGAATTTTATTATCCAAGACCCCAATGTGTCACAAACAAAAGGTAGAAAGAGAAAAGATTCTGACAGTGCCCGTGTACAAGAAAGATATAAAAGTGGTGTAGAATTGTCGATGGATAAGACACTGGTTAAAAGAAGGGCATGCAAATACTGTGGAGAATATGGTCACTATCAATCAACTTGCAAAAATAAAACAACTTGA 2199 0.3329 MEETILDDELESNINLSEEPQINIVAEENIEPYVGMEFDSLEKATDFYRLFSKAKGFGIRTRSSKPNYCILVCVREGKLPVKSTNDNNVEVKKKCSTMRMGCQASLTISKENNSHMWTVKSYDNNHNHAMASPKSVSYLRCHKNMNSAAKNLIEKFSEEGLPTGKVASMFKESDLAFSNRDCWNHMRNVRTNNLDIGDAQAVFNYCKHKQAQNSNFFYAIQCDDEARMVKKIWIDARSRLAYQHFGDVVTFDTTYKTNKYSMPFAPFTGVNHHLQSILFGCALLQDESEISFTWLFETWLEAMNGKKPISIITDQDLAIGAAVTKVFPQTRHRLCLWHIRKNFPEKLAHIYHKKSKFKHELKRCIRESPTVNDFEVDWQQIMDTYNLQENEWLQRLFEIRESWIPVYNRKTFFAGMNTTQRSESINSFFDSFVNSTTTLQEFVVKFEKAVNNRYEAEKREDFESKHKSRILSIKSKIEEHAASIYTRNMFGKFQHELALVSQFTKHKIEKNGSQYRYQISNCFKDRDKFIVDINLESKDATCTCQLFEFMGILCRHILTIFQTKNILQIPNQYILHRWTKEANRYMEVSVMDSHDDGVDTLRSIHLHQQFSKFSKFSKQSKEAYEFIMVEFERICNTLETMGLKFSNVNDAPIDLQQQDDDTHDNVSNFIIQDPNVSQTKGRKRKDSDSARVQERYKSGVELSMDKTLVKRRACKYCGEYGHYQSTCKNKTT 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi705g00002 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 639 IPR031052 GO:0006355
Vivi705g00002 732 SUPERFAMILY Retrovirus zinc finger-like domains 709 730 IPR036875 GO:0003676|GO:0008270
Vivi705g00002 732 Pfam MULE transposase domain 248 342 IPR018289 -
Vivi705g00002 732 ProSiteProfiles Zinc finger CCHC-type profile. 714 729 IPR001878 GO:0003676|GO:0008270
Vivi705g00002 732 Pfam SWIM zinc finger 531 565 IPR007527 GO:0008270
Vivi705g00002 732 ProSiteProfiles Zinc finger SWIM-type profile. 529 565 IPR007527 GO:0008270
Vivi705g00002 732 SMART 26again6 540 567 IPR006564 GO:0008270
Vivi705g00002 732 Pfam FAR1 DNA-binding domain 46 130 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi705g00002 MULE 7.4e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi705g00002 - - vvo:131633311 1452.96