Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi705g00001 ATGGCAGTTAGAAGAAGAAACGCGCTTATTCTCATAAGCACTTTTTCAACCAATTTCTCCACCATTTCTCATCATCATCACACTTCTCATTACAGAAAACAAATCTCCCTCGCTAATCTCTTCCAATCCTTCGGTTTCCCCTCCTCCAACCTTCACCATTTCCTCTCTCATAACCCATTCCTTTTCAACTCCGATCCATCACACCTTCGCAAATCACTCTCCACTCTCTTTTCCTTCCGAATCCCACAGAAAACCCTAATTTCCCTCGTTCACGATTGCCCTTCTGTCTTGGAACCCCAATTTCTACACAATTGGGAATCAGCTTTTCCGAAATTCAAATCAAAGGATTTTAACCCTTCCCCGTTGATGATCGCGAACTTGTTGCGATGTTCTAGAAAGTTCCATTTAAACCCACTTCAAATCTCGCAAAAAGTTGAGATTTTTAAGGGTTTAGGGTTTTCTGAAGATGTTACTGCTAGGGTTTTGGAAGAGTTTCCCAGCGCGGTTGTAATGACTGAGGATAAAATTGTTGGCGTAATTGATTTTCTTGTGGAATTCGGTGTTCAGAGAGATGAAATCGATAGGGTTGTTAGATTGTATCCTAGGGTTTTGGGATTTGGAGTTGAAGATAGGTTGAAGCCGCTGATTCATGAGATGAGGGGGTTGGGATTTTCTCGACGGGAGATTAAGGCGGAGGTTGTTAGGGATCCGGGTATTCTAGGAATGGAGATCGGGGAGTTTTCGCGGTGTTTGAAGCTGTTGCAGAGTTTGAAATGCAGGGAGGCAGTTAAAGAGAGTATTTTGGGGGATGGTTTGGTTAGAGCTTGTTTTGGAGTGAAATTAAGAGTGGATTGTTTGTGCGGTCACGGGTTGATTCGGAGGGATGCTTTGAAGGTGTTATGGAAGGAACCGAGGTTGATGAGTTATGAGTTGGAGGAAATTGAGAAGAAGATTGAGTTTTTAGTTCAAAGGATGAAGTATGGTGTTGAATGTTTGCATGAAGTTCCTGAATATTTGGGTGTGAATTTTGAGAAACAGATTGTTCCTAGATACAATGTGATTGAGTATTTGAAAGGAAAAGGCGCGATTGGGTTTGAAGTTGGATTGAAGGATATTATCAAACCAACTAGGCTTAGGTTTTATAATCTTTATGTGAAGCCTTATCCAGAATGTGAAAAAATATATGGCAGATTTTCGAAGGTTGAAGTTAAAAGAAAGCATCCTGATGGACTTTGGAAGCTGTTCAAACCGAAGAAGTTCTCTCTAACCAGTAAAGATGTGAAGAACATGAAGGCTTTCATGGACTCCTCACCGGTGTAG 1320 0.4136 MAVRRRNALILISTFSTNFSTISHHHHTSHYRKQISLANLFQSFGFPSSNLHHFLSHNPFLFNSDPSHLRKSLSTLFSFRIPQKTLISLVHDCPSVLEPQFLHNWESAFPKFKSKDFNPSPLMIANLLRCSRKFHLNPLQISQKVEIFKGLGFSEDVTARVLEEFPSAVVMTEDKIVGVIDFLVEFGVQRDEIDRVVRLYPRVLGFGVEDRLKPLIHEMRGLGFSRREIKAEVVRDPGILGMEIGEFSRCLKLLQSLKCREAVKESILGDGLVRACFGVKLRVDCLCGHGLIRRDALKVLWKEPRLMSYELEEIEKKIEFLVQRMKYGVECLHEVPEYLGVNFEKQIVPRYNVIEYLKGKGAIGFEVGLKDIIKPTRLRFYNLYVKPYPECEKIYGRFSKVEVKRKHPDGLWKLFKPKKFSLTSKDVKNMKAFMDSSPV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi705g00001 439 SMART mt_12 230 260 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 329 363 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 159 189 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 52 82 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 124 154 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 FunFam Transcription termination factor MTERF15 mitochondrial 173 395 - -
Vivi705g00001 439 Pfam mTERF 136 250 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 Pfam mTERF 282 375 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 PANTHER CGI-12 PROTEIN-RELATED 127 388 IPR003690 GO:0003690|GO:0006355
Vivi705g00001 439 Gene3D Transcription termination factor 3, mitochondrial 172 401 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi705g00001 mTERF 2.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi705g00001 - - pcin:129319850 531.176